DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and grin2cb

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_009305071.3 Gene:grin2cb / 100333648 ZFINID:ZDB-GENE-100308-2 Length:1328 Species:Danio rerio


Alignment Length:669 Identity:127/669 - (18%)
Similarity:238/669 - (35%) Gaps:192/669 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GLTGRPIAIWFLDSLRSYFRLEMYLNQLGSPYKR--NGFFLVIYTGLEDQPMESLKIMFRRLLNM 148
            ||.| |..||.:.||           .:|:|...  ..|.:.:.:.:.|:..::|:...|..:.:
Zfish   252 GLLG-PGYIWIVPSL-----------AVGNPEAAPPASFPVGVISIITDRWRKTLRQRVREGVAI 304

  Fly   149 YVLNVNVFLQRDGTVHLYTYYPYGPHHCQSSLPVYYT------------AFQDLAAPANGF---- 197
            .|..|:.|.:..|      :.|.|...|.|.:..|..            ..:||:..::|:    
Zfish   305 IVKGVHSFHKHRG------FIPEGHSDCSSPVKSYANNSLFRHMLNVSWEHKDLSFNSDGYLTNP 363

  Fly   198 ---------------------GLTK---PLFPR-------KLTNMHGCEMVVATFEHRPYVIIED 231
                                 |:.:   |::||       ...|.|   :.|||.|.||:||:|.
Zfish   364 SMVIIALDRENHWDKVGSYEGGILQMRYPVWPRYGSFLEPVSDNRH---LTVATLEERPFVIVES 425

  Fly   232 -DPKT--------PGGRSIHGIEGL------------------IFRSLAERMNFTIKLVEQKDKN 269
             ||.|        |..|..:..|.:                  |.:.|:..:.|:..|....:..
Zfish   426 VDPATGTCVRNTVPCRRQSNRTESIIGHTEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGK 490

  Fly   270 RGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPI-VLVVPSGGSISPMG 333
            .|::: .|.:.|::..:.....::.......::.||:::..|..:....| |:|..|.|::||..
Zfish   491 HGKMV-RGVWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSA 554

  Fly   334 RLTRPFRYIIW-----SCILVSLIFGFVLICL--------LKITALPGLRNLVLGRRNRLPFMGM 385
            .| .|:...:|     .|:.|..:..||....        |.....||.....:|:       .:
Zfish   555 FL-EPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAPGGPTFTIGK-------SV 611

  Fly   386 WASLLGGLA------LYNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSLSEV 444
            |  ||.|:.      :.||:...::.::::|....:|..|:||..|...:...:....:..||:.
Zfish   612 W--LLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDK 674

  Fly   445 LAK-------DYEFRILP--ALRTIFKDSMPTTNFHAV----LSLEESLYRL------------- 483
            ..:       .:.|..:|  :.....:.:.|..:.|.:    ..:||:|..|             
Zfish   675 KFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVEEALNSLKTGKLDAFIYDAA 739

  Fly   484 -------RDEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDPLMTAPLTFY---MRPHSYFKR 538
                   :||....:|:              |..|...|           |.|   ::..|.:||
Zfish   740 VLNYMAGKDEGCKLVTI--------------GSGKVFAT-----------TGYGIALQKDSRWKR 779

  Fly   539 RIDRLIMAMMSSGIVARYRKMYMDRIKRVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVALIVFIL 603
            .||..::..:..|...|...:::..|.:..|...:..| |.|..::|:|........::|:||..
Zfish   780 PIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSK-LDIDNMAGVFYMLLVAMGLSLLVFAW 843

  Fly   604 EILTTNHRRLRRAFNVINR 622
            |.|.  :.:||.:.:..:|
Zfish   844 EHLL--YWKLRHSVHKSDR 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 17/88 (19%)
Lig_chan 343..592 CDD:459656 53/303 (17%)
grin2cbXP_009305071.3 None

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