DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and grin2db

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_073782035.1 Gene:grin2db / 100149482 ZFINID:ZDB-GENE-100920-7 Length:1984 Species:Danio rerio


Alignment Length:466 Identity:88/466 - (18%)
Similarity:182/466 - (39%) Gaps:88/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 VATFEHRPYVIIE-----------DDPKTPGGRSIHGI---EGL-------------IFRSLAER 255
            |.|.|.||:||:|           |  ..|..|.::..   ||:             |.:.||..
Zfish   462 VVTLEERPFVIVELADAASGTCIRD--SVPCRRPLNASALQEGVAPVKQCCKGFCIDILKRLARI 524

  Fly   256 MNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPI- 319
            :.||..|....:...|:.: ||.:.|::..:|....::.......::.||:::..|..:....| 
Zfish   525 VGFTYDLYLVTNGKHGKKI-DGVWNGMVGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGIS 588

  Fly   320 VLVVPSGGSISPMGRLTRPFRYIIW-----SCILVSLIFGFVLICL--------LKITALPGLRN 371
            |:|..|.|::||...| .|:...:|     .|:.|..:..|:....        |:.....|...
Zfish   589 VMVSRSNGTVSPSAFL-EPYSPAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQSGKKAGGSK 652

  Fly   372 LVLGRRNRLPFMGMWASLL-GGLALYNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMR 435
            ..:|:...|    :||.:. ..:.:.||:...::.::::|....:|..|:||..|...:...|..
Zfish   653 FTIGKSIWL----LWALVFNNSVPVENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYI 713

  Fly   436 SPIKSLSEVLAKDYE----------FRILP--ALRTIFKDSMPTTNFHAV----LSLEESLYRLR 484
            ..:..||:   |.::          |..:|  :.....:.:.|..:.:.|    .|:|:::..|:
Zfish   714 DTVSGLSD---KKFQHPTEQYPPLKFGTVPNGSTEKNIRSNYPDMHQYMVKYNQKSVEDAISHLK 775

  Fly   485 DEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDPLM-TAPLTFYMRPHSYFKRRIDRLIMAMM 548
            ...   :...:....|..:..|.....:.:|:....:. |......:..:|.:||.:|..::.::
Zfish   776 TGK---LDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLV 837

  Fly   549 SSGIVARYRKMYM------DRIKRVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVALIVFILEILT 607
            ....:....::::      |:|:.:|.:       |.|..::|:|........::|:||..|.|.
Zfish   838 GDDEIEMLERLWLSGICHNDKIEVMSSK-------LDIDNMAGVFYMLLVAMGLSLLVFAWEHLV 895

  Fly   608 TNHRRLRRAFN 618
              :.|||...:
Zfish   896 --YWRLRHCMS 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 19/88 (22%)
Lig_chan 343..592 CDD:459656 44/285 (15%)
grin2dbXP_073782035.1 None

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