DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and hip1

DIOPT Version :10

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_596575.1 Gene:hip1 / 2540219 PomBaseID:SPBC31F10.13C Length:932 Species:Schizosaccharomyces pombe


Alignment Length:982 Identity:262/982 - (26%)
Similarity:440/982 - (44%) Gaps:169/982 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLLKPAWV-HHDDK----QIFSVDIHKDCTKFATGGQGSDCGRVVIWNLLPV--LSDKAEFDAD 58
            |::.|..|: |.||:    .|||:.||.|.::.||||..   |.:.||:...:  .::....:.|
pombe     1 MKIKKIPWLGHFDDRGHRLSIFSIHIHPDGSRIATGGLD---GTIRIWSTEAINRENENENENED 62

  Fly    59 VPKMLCQMDQHLACVNCVRWSQNGQNLASGSDDKLIMIWRKS---AGSSGVFGTGGMQKNHESWK 120
            :||.||.|..|...|..||:|.|||.|||||||::::||.|.   .|....||:|  :|:.|:|:
pombe    63 LPKQLCCMSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEAIPGLGSTFGSG--EKHTENWR 125

  Fly   121 CFYTLRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLGR 185
            .:..|.|||.|:.||.||.:...:.|..:|:::|:|:...| ..:..::.|...|||:::||.|:
pombe   126 SYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTF-ERLKRIEAHQSHVKGITFDPAGK 189

  Fly   186 FLASQSDDRSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVSAHAMNGGGPTAQI 250
            :.|::||||:||:|...::|:..|||.||.....:|:..|.||||||:::.:.:||||......|
pombe   190 YFATESDDRTIKVWRVSDFSIEKTITGPFNNSPLSTYFRRPSWSPDGKHIAAPNAMNGPVSCVSI 254

  Fly   251 IEREGWKCDKDFVGHRKAVTCVRFHNSILSRQENDGSPSKPLQYCCLAVGSRDRSLSVWMTALQR 315
            |||..|..:.:.:||...|....| |..|.|.:||      ...|.||.|.:|||||:|.:||.|
pombe   255 IERGTWTSEINLIGHEGPVEVTAF-NPKLFRDKND------KLVCILACGGQDRSLSIWSSALPR 312

  Fly   316 PMVVIHELFNASILDLTWGPQECLLMACSVDGSIACLKFTEEELGKAISEEE-QNAIIRKMYGKN 379
            |::....:|..||.|:.|.|....|..||.||::....|.:||.|..:|:|| ..|:.:..:|::
pombe   313 PLLSCQNVFQKSIGDVCWSPDGLSLFLCSYDGNVLVCTFEKEEFGDMVSDEEISKALAKYGHGRH 377

  Fly   380 YVNGLGKSA----------PVLEHPQRL------LLPQGDK--------PTKFPL---------- 410
            .: .|.:||          .:|:.|..|      |:||...        |.|.|.          
pombe   378 GI-VLPESAKQLELEETAYAILKKPSSLSTTDPTLVPQSSSTPKSAQKTPQKLPAFLPNRLTAET 441

  Fly   411 --SNNNEANQRPISK------------------QTETRTKDGKRRITPMFIPLHEDGPTS--LSM 453
              :|...|::..|:.                  |..|.||:||:|:.|..:......|::  |:.
pombe   442 VDTNKLTASKEQIASPKRPGPSDNGNEIPTKFVQKVTITKEGKKRVAPQLLTTLSATPSTSRLAS 506

  Fly   454 NIVSSSGSSTTALTSCSAAIGTLPAAAPTESAATPLMPLEPLVSKIDLGRLDSRLKTQPASQRRQ 518
            ..:..:|||.......|..|.:||      ....|::    :|..          ||:...:..:
pombe   507 TQLQHTGSSQLPPQQFSQPINSLP------KGGVPIL----IVGN----------KTKVNHENDE 551

  Fly   519 SLPFDPGQSNELLRTPRLEEHQS----STCSPSNLNVTATGKSEFVKAALD----YRLHVSNGHL 575
            |   |.....|.:....|:.:.|    |:.|.||:|..|......:..:|:    |.|.|.||  
pombe   552 S---DQALQEEKIEEGLLKNYYSSLIDSSTSISNINFEAPRYKTNIVHSLNNEQKYVLEVKNG-- 611

  Fly   576 KTQHGMLAKVTASDSKEMLWEFYVGSPLVNLNLCEKYAMLCSLDGSMRLISMETGCPVFPAISLT 640
             |......::.|.::....|..|:..|::.:.....:..:...|||:.|.|: ||..:.|.|.:.
pombe   612 -TSEKNPTRIVALENGNTKWMDYLPRPVILVTGSIHFWSIACDDGSLHLYSL-TGSRLLPPIMIE 674

  Fly   641 SSA--VHCAFSPDNSLVGVLTECGLLRIWDIAKKVVSLAAGCL-ELLNK---------------H 687
            |.|  :||    :|:.:..::..|::..|::..|.....|..| .:|::               |
pombe   675 SKASFLHC----NNAYLLCISSSGMVYAWNVVNKTALFTANSLAPILSRVSNNVTIENNSTDIPH 735

  Fly   688 GTAAQFSVTNQGMPLIGFPSGNSYSYSTSL-------QSWLVLATKDAIMYHGIRGTLPRDMDQM 745
            ...|  |::.:|:|.:...:|.:|.||:::       :.|..:.:::    ....|.|..:....
pombe   736 VVIA--SISKEGVPSVTLSTGETYVYSSTMLCWQRITEPWWAIGSRE----WDSSGLLQSNTQTE 794

  Fly   746 QQKFPLLSMQASSQNYFSFTGSMELRHS-----------ESWQQCAKIRFIENQIKLCEALQSLD 799
            .|  ||...:..:.|....:|..:|...           :.::....|..:||:|.....|:..|
pombe   795 SQ--PLKIYEHRTNNVLMDSGRGKLLQKMVADAITEEGYDDFETIVTINHLENKIASARLLKLDD 857

  Fly   800 ELQHWHKMLTFQLATHGSEKRMRVFLDDLLSMPEPGIS----QFVPK-LELMQCVLDTLKPHSEW 859
            |.....::....|..||..:::..||.:|.:..:..|.    :.|.| |.:::..:.|.......
pombe   858 EFLVTSEVYVRLLMHHGLWQKLEEFLGELRTQTKCSIKLSGREVVAKMLVVLRQAVQTDNEFDRA 922

  Fly   860 NRLHSEY 866
            |:|..:|
pombe   923 NKLIEKY 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 14..349 CDD:238121 130/343 (38%)
WD40 repeat 16..68 CDD:293791 19/53 (36%)
WD40 repeat 74..127 CDD:293791 24/55 (44%)
WD40 repeat 132..169 CDD:293791 9/36 (25%)
WD40 repeat 176..211 CDD:293791 15/34 (44%)
WD40 repeat 223..263 CDD:293791 16/39 (41%)
WD40 repeat 275..322 CDD:293791 19/46 (41%)
WD40 repeat 328..350 CDD:293791 9/21 (43%)
HIRA_B 424..442 CDD:462802 8/17 (47%)
Hira 630..828 CDD:462211 44/233 (19%)
hip1NP_596575.1 WD40 <15..348 CDD:441893 130/345 (38%)
WD40 repeat 21..69 CDD:293791 17/50 (34%)
WD40 repeat 78..132 CDD:293791 24/55 (44%)
WD40 repeat 137..173 CDD:293791 9/36 (25%)
WD40 repeat 180..215 CDD:293791 15/34 (44%)
WD40 repeat 222..267 CDD:293791 17/44 (39%)
WD40 repeat 275..322 CDD:293791 20/53 (38%)
WD40 repeat 325..347 CDD:293791 9/21 (43%)
HIRA_B 475..496 CDD:462802 8/20 (40%)
Hira 664..886 CDD:462211 44/233 (19%)

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