DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cph and znf516

DIOPT Version :10

Sequence 1:NP_001356899.1 Gene:Cph / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001153141.1 Gene:znf516 / 100003866 ZFINID:ZDB-GENE-060503-194 Length:1084 Species:Danio rerio


Alignment Length:1329 Identity:246/1329 - (18%)
Similarity:402/1329 - (30%) Gaps:493/1329 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ISEDHGFRSLSHSDSTENDAVATQDILTCGACQKAFALSDIVKFIQHKVLQCNKENYGQCATQNP 72
            :||...|....|    :|..|......||..|.::|..  :....||.     :::.|:...:.|
Zfish     8 VSEQEPFSKGGH----DNPDVKKSRGHTCELCGRSFPF--LSSLSQHM-----RKHTGEKPYKCP 61

  Fly    73 QMD-RDAEEGRPLSLVNRRPSISAPISGRKSAPASAAAAVAAAAAAAAAAAAASSTASGSRIHTP 136
            ..: |.|::|          |:.|.|...|                   ....|.:..|..    
Zfish    62 HCEHRSAQKG----------SLKAHIRSHK-------------------LDGLSQSGGGEE---- 93

  Fly   137 PPSPADLLADGASSTPKRLVDENDNTTPKDSETGATTLDSNAAPS-SPAAIERQSSGDSSCEMEE 200
                .|:..:|          |.:...|:|.       .|.::|: |.:|..:..||:.:.:|.:
Zfish    94 ----EDMDEEG----------EKEGGVPEDQ-------GSCSSPTESTSACNKVVSGEDATKMRK 137

  Fly   201 QQDRQD-------KQS------------QPKQAKVKQE----------PYD---EEGVNHHQNQD 233
            :..:::       |||            |.:..|..||          ||:   |:.:..|..:|
Zfish   138 KSGKKERIPGESGKQSVQCSLCRKRLSGQAELEKHMQELHKVLRCELCPYETQQEDQLQAHVEKD 202

  Fly   234 DDDDEEMEERSLAKRPKMELVDAEANTVHTEPSNYTCSTCKTRYTSAWRLIQHV---QHS--HGV 293
            ...|||    |:.|    |:..:|..........:.|..|...:|.||.|..|:   |:|  ||.
Zfish   203 HPSDEE----SITK----EVSTSEETDGILGKGEFPCEQCDQVFTQAWCLKTHMKKHQNSMDHGC 259

  Fly   294 KIYVESPGGGATLTVATPAALNNSALALAAAAAAASASGLASPQPAVSPN-----PAVTSSAKRS 353
            :|        .......|..|.               |.:.:....|.|.     ||..:...:.
Zfish   260 RI--------CGRRFREPWFLR---------------SHMKTHNTKVKPRSNSYLPATVNEVAQD 301

  Fly   354 SPLGAAGSTILSTSVSSTCSNSLVNTSGGSISNTSSIGSPQQQQLQLQQQQAQQQQQRVQQQQ-R 417
            .          |..|:..|...|....|....:..|        |||.:|..:..:|.::.:. .
Zfish   302 E----------SNLVNEVCLYELCAKCGNFFHDRKS--------LQLHEQVHKNIEQPLKNKNCN 348

  Fly   418 ENLASAMAAGMRHHPLLPPPEAMHANPFQLLRMPLPPALAQAGNV----VPTVAPLFGRPSPADH 478
            ||..               |.....:..|.|.      |..|||:    ..|:........|...
Zfish   349 ENNF---------------PSVTKTSFLQCLN------LKPAGNIENPSEGTIGKRIPELDPVSS 392

  Fly   479 YRMEQL--------VSEQFRHHGFNLAAAAAAAQAQFNANGQVVGGVVSGSGEPRPPSSSSSGS- 534
            |:..||        |:|:.:.....||.|..|...:       .|..|....:.|..|..|:.| 
Zfish   393 YQAWQLATRGKLVEVTERSQGWEERLADADVAYDRE-------KGEYVLLRQDKRKKSLDSTVSI 450

  Fly   535 ----QRGSVPPAALPPPSLSSQQQQQQQQAVQQQQQQGAQQQLQSAQQQQQSQQQSQQQQQITPG 595
                :||:|.....|      .|....::.......:.:.:.|..::.:..|:...:..|:.:..
Zfish   451 PTKKRRGAVTQGCTP------DQHSNGEKNSHVSTGERSPENLSDSEYRPTSRPSRKNSQKTSEC 509

  Fly   596 LVGGAGGSLKLEPQQMDFYSQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHFASPSPSQQQQQQ 660
            |..|.|                                                     .:.|||
Zfish   510 LECGKG-----------------------------------------------------FRTQQQ 521

  Fly   661 LATIPRPHSLTPPEKLGDASSENGSLGLILASTPRSASTPPSKTGDVSLQEPIAHCYSCSYCDKK 725
            :..    |.|.....||:....||..        |..::.|||||     |...|          
Zfish   522 MVI----HMLIRHGGLGETIGGNGLF--------RKTTSSPSKTG-----ESAGH---------- 559

  Fly   726 FRFENNLIIHQRT-----HTGEKPYKCTACDFECSHIQKLMKHMRVHRSPADDQDNQDNQDDGSN 785
            ||       .||.     .|.:|||.|..|||..|....:..|::.|:|..        :|.|..
Zfish   560 FR-------DQRRAGFLGDTDKKPYTCEHCDFCTSEPSAIAAHIQTHQSAV--------RDWGQR 609

  Fly   786 ADSL-------ETNEADNDEDPN-----------PDESEEELGDGDNDPDGDGDLDGEDEDEDEL 832
            :|:|       :|::.::...|.           |..:...|   :.....|..|..|:|....|
Zfish   610 SDALTSSLSQSQTHQTNHTGFPRLRNALLQQPYWPYTTSTHL---ERAALSDAALKTEEEKSKGL 671

  Fly   833 EECEDMDYKAED--LSVSNRIDGKSQ--------------------------------------- 856
            ||....| |||.  |::|..:|.|.:                                       
Zfish   672 EESSSTD-KAESNLLNLSVDVDNKKEVSSILLNNLVRHQCPYCSYATHYPEVLWIHQRIAHKIDS 735

  Fly   857 -------SPKTTSSGATSLVG-----------ELMDKFGLSNIAQY--------------SEAYK 889
                   :||....|..:|:.           |..|...|..:..|              |:...
Zfish   736 TTLVPKWAPKNGLKGPKTLLDFKRRTGPPPFLEGKDCPSLPQMRSYRTSPPDCSPGGTKKSKPLT 800

  Fly   890 QALQESGRKEAAAAAAAAAAAADNNNRGGAGAPLSDKLNG------------------------- 929
            ..::.|..:..:...|.|..|:.::::.......:|:|.|                         
Zfish   801 STVESSSSQNKSWHTATAPGASSHSSKHKTSKSRTDELAGSKHKTDIHQNNSSRPMASPQKTGNP 865

  Fly   930 -----------LPVAAL--------RLRDEFAKNCNMFQQPQDGGAPSQ----VPLFNPF----- 966
                       ||...|        .|.|:.:...:..|.|....:.:|    |..::|:     
Zfish   866 KTGSRVVESSLLPQEGLHFMLSSKHNLSDQRSSKAHAPQTPSKSDSQAQDTPSVAGYDPWNRLGL 930

  Fly   967 --PNPFELSKRMK-MDGGDWWGMSQAL--------HRNEALFENLKLKPLGLGGANSLI--QGPL 1018
              |:|...|||.. .||.:  |::..|        |...||:.:        .|.:|.:  |..|
Zfish   931 SGPSPHSQSKRQSTADGAE--GVTDILSFLKNCNPHDLAALYHH--------WGYSSAMTEQAGL 985

  Fly  1019 LKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGK 1083
            .:..|:|....|..|.|.|...|:...|.||||||:|::|..|.|:.:|...|..|::|      
Zfish   986 ARSGSQQGEYVCPVCRKSFNQPSHYRTHMRSHTGERPFQCRYCPYSASQKGNLKTHVQT------ 1044

  Fly  1084 DVYRCRFCDMPFSVPSTLEKHMRKCVVNQ 1112
             |:|..|.:..:.     ::.:|:...|:
Zfish  1045 -VHRLAFDNAQYP-----DRRLRQVPTNE 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CphNP_001356899.1 zf-C2H2 717..739 CDD:395048 4/26 (15%)
C2H2 Zn finger 719..739 CDD:275368 4/24 (17%)
zf-H2C2_2 731..756 CDD:463886 10/29 (34%)
C2H2 Zn finger 747..767 CDD:275368 6/19 (32%)
zf-C2H2 1029..1050 CDD:395048 7/20 (35%)
C2H2 Zn finger 1030..1050 CDD:275368 7/19 (37%)
zf-H2C2_2 1042..1067 CDD:463886 11/24 (46%)
C2H2 Zn finger 1058..1078 CDD:275368 6/19 (32%)
C2H2 Zn finger 1088..1106 CDD:275368 1/17 (6%)
znf516NP_001153141.1 zf-C2H2 30..52 CDD:395048 6/28 (21%)
C2H2 Zn finger 32..52 CDD:275368 5/26 (19%)
zf-H2C2_2 44..69 CDD:463886 5/29 (17%)
C2H2 Zn finger 60..80 CDD:275368 7/29 (24%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..279 CDD:275368 4/42 (10%)
zf-C2H2 995..1017 CDD:395048 7/21 (33%)
C2H2 Zn finger 997..1017 CDD:275368 7/19 (37%)
zf-H2C2_2 1009..1034 CDD:463886 11/24 (46%)
C2H2 Zn finger 1025..1046 CDD:275368 7/27 (26%)

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