DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Nf-YC and SPCC16C4.22

Sequence 1:NP_572354.1 Gene:Nf-YC FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001343092.1 Gene:SPCC16C4.22 PomBaseID:SPCC16C4.22 Length:87 Species:Schizosaccharomyces pombe

Alignment Length:76 Identity:25/77 (32%)
Similarity:46/77 (60%) Gaps:0/77 (0%)


  Fly   153 VLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIA 217
            ||||:|:|:|:|.||:....:..:.||.:.|.|.|:::|...|:...:..:|:.::..|:...:.
pombe     9 VLPLSRVKRIIKQDEDVHYCSNASALLISVATELFVEKLATEAYQLAKLQKRKGIRYRDVEDVVR 73

  Fly   218 NYDQFDFLIDI 228
            ..|||:||.|:
pombe    74 KDDQFEFLSDL 84

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 CBFD_NFYB_HMF 154..216 CDD:279185 18/62 (29%)
SPCC16C4.22NP_001343092.1 BUR6 <10..>86 CDD:333362 24/76 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R4325
TreeFam 00.000 Not matched by this tool.
11.030

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