DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YC and NF-YC2

DIOPT Version :10

Sequence 1:NP_572354.1 Gene:Nf-YC / 31622 FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_176013.1 Gene:NF-YC2 / 842070 AraportID:AT1G56170 Length:199 Species:Arabidopsis thaliana


Alignment Length:185 Identity:82/185 - (44%)
Similarity:114/185 - (61%) Gaps:13/185 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QQQQQGQQQQQTVPMASLVSNACTLVNPSMSVTVATTVASGAKEKTTKATRTQVARKPPPTIDNF 133
            :|.::||||||...|..:..:|    ..|..|..|:.:|...........:.|..::    :..|
plant     2 EQSEEGQQQQQQGVMDYVPPHA----YQSGPVNAASHMAFQQAHHFHHHHQQQQQQQ----LQMF 58

  Fly   134 WPNIVSEV-HSIGQVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWV 197
            |.|.:.|: |:   .|.|:..|||||||||||.||:.:||:.|||::||||||.||.|||:.||:
plant    59 WANQMQEIEHT---TDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWI 120

  Fly   198 HTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSG 252
            ||||::|||||::|||.||:..|.||||:||:||:|:|......|| |:..|..|
plant   121 HTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTK-GTIPSVVG 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 HFD_NFYC-like 148..230 CDD:467033 54/81 (67%)
NF-YC2NP_176013.1 HFD_NFYC-like 70..153 CDD:467033 54/82 (66%)

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