DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YC and pole4

DIOPT Version :10

Sequence 1:NP_572354.1 Gene:Nf-YC / 31622 FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001016605.1 Gene:pole4 / 549359 XenbaseID:XB-GENE-5722002 Length:115 Species:Xenopus tropicalis


Alignment Length:76 Identity:29/76 - (38%)
Similarity:48/76 - (63%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 KHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQ 214
            |...|||:|||.:||.|.:..:.:.|:..:.:||.|.||:.:...|:::.::.:|:||||.|:..
 Frog    35 KQARLPLSRIKALMKADPDLSLASQESVFVISKATELFIETIAKDAYLYAQQGKRKTLQRKDLDN 99

  Fly   215 AIANYDQFDFL 225
            ||...|:|.||
 Frog   100 AIDAIDEFAFL 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 HFD_NFYC-like 148..230 CDD:467033 29/76 (38%)
pole4NP_001016605.1 HFD_POLE4-like 38..114 CDD:467054 28/73 (38%)

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