DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Nf-YC and chrac1

Sequence 1:NP_572354.1 Gene:Nf-YC FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001013311.1 Gene:chrac1 ZFINID:ZDB-GENE-050227-18 Length:114 Species:Danio rerio

Alignment Length:79 Identity:26/80 (33%)
Similarity:43/80 (54%) Gaps:0/80 (0%)


  Fly   154 LPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIAN 218
            ||::|::.|||...:...|..:|..|..||.|.|:|.|.:.::.:.......||..||:|..:..
Zfish    16 LPISRVRLIMKSSPDVSCINQDALFLTTKATELFVQHLALSSYENGPSKDTNTLSYSDLADTVEE 80

  Fly   219 YDQFDFLIDIVPRE 232
            .:.|.||.||:|::
Zfish    81 TETFQFLTDILPKK 94

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 CBFD_NFYB_HMF 154..216 CDD:279185 20/62 (32%)
chrac1NP_001013311.1 H4 15..75 CDD:304892 19/59 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1622159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R4325
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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