DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Nf-YC and pnhd

Sequence 1:NP_572354.1 Gene:Nf-YC FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_988865.1 Gene:pnhd XenbaseID:XB-GENE-480588 Length:319 Species:Xenopus tropicalis

Alignment Length:27 Identity:7/28 (25%)
Similarity:13/28 (46%) Gaps:0/28 (0%)


  Fly   464 TGELTNVPIAINASHLNLLQRLQMQQQ 490
            :|...:|.:.:..||..:.||:....|
 Frog    56 SGSPVSVDVGLCRSHCGIPQRINSYNQ 82

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 CBFD_NFYB_HMF 154..216 CDD:279185
pnhdNP_988865.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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