DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YC and nfyc

DIOPT Version :10

Sequence 1:NP_572354.1 Gene:Nf-YC / 31622 FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_955933.1 Gene:nfyc / 323445 ZFINID:ZDB-GENE-030131-2165 Length:360 Species:Danio rerio


Alignment Length:468 Identity:156/468 - (33%)
Similarity:208/468 - (44%) Gaps:141/468 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TIDNFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTM 193
            ::.:|||.::.|:.::...|.:.|.||||||||||||||:.|||:.|||:|||||.:.||.|||:
Zfish    16 SLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTL 80

  Fly   194 HAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSGMAGAAS 258
            .||:|||:::||||||:|||.||..:||||||||||||:::||...|:                 
Zfish    81 RAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDDLKPPKRQE----------------- 128

  Fly   259 SAASTSNTATSNAAASVAGNATATGNFVASGSTVPATTAGGLKLDTTGATNAAEVLGFSTVNSDI 323
                       ....|||             .|.|                   |..:.|:....
Zfish   129 -----------EVRQSVA-------------PTEP-------------------VQYYFTLAQQP 150

  Fly   324 FSAQLQQQQQQQQQHAAQQQQQQQQQQHHQAHPQQVQIIQQGAGGQQLQYFIALPSQQAAQLVQQ 388
            .:.|:|.|||.||. :|......|..|...|.|||.|:: ||...|||               ||
Zfish   151 SAVQVQGQQQGQQV-SAPTATTLQPGQIIIAQPQQGQVL-QGTTMQQL---------------QQ 198

  Fly   389 PQPAQNHLPINILSTQQPTQQLILTAGPNGQLTATPAPQTTAQ-QQTALLQNLAQQQQQHQQHQ- 451
            .|.||:.                  |.|   :|:.|......: ||..::|..||.|.|.|..| 
Zfish   199 VQVAQSQ------------------ATP---ITSAPVTMQVGEGQQVQIVQAAAQGQAQAQTAQP 242

  Fly   452 --QQIQLLQQVVTPTGELTNVPIAINASHLNLLQRLQ-------MQQQQQ------QQQQQQQQQ 501
              |.:|::||::|.|||:..:|:.:|...|..::..|       :|.|.|      ||..|.:.|
Zfish   243 AGQTMQVMQQIITNTGEIQQIPVQLNTGQLQYIRLAQPVSGTQVVQGQIQTLAANTQQLSQTEVQ 307

  Fly   502 QQQQQVIIPTQLLTTQQLLQLGGAPTVAHQQQQQQQQHANLTQQSNASAVASGTPIFINSTMTGA 566
            |.|||.   .|....|||.|:         ||........|||           |:||.||   .
Zfish   308 QGQQQF---NQFTDGQQLYQI---------QQVTMPAGQELTQ-----------PMFIQST---N 346

  Fly   567 QAAATQAQQQQSA 579
            |.|..|...|.||
Zfish   347 QTADGQVTTQVSA 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 HFD_NFYC-like 148..230 CDD:467033 57/81 (70%)
nfycNP_955933.1 HFD_NFYC-like 35..117 CDD:467033 57/81 (70%)

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