Protein Alignment Nf-YC and Nfyc

DIOPT Version :9

• Sequence 1: NP_572354.1
• Gene: Nf-YC / 31622
• FlyBaseID: FBgn0029905
• Length: 601
• Species: Drosophila melanogaster
• Sequence 2: NP_036998.1
• Gene: Nfyc / 25337
• RGDID: 3173
• Length: 335
• Species: Rattus norvegicus
• Alignment Length: 469
• Identity: 140/469 - (29%)
• Similarity: 192/469 - (40%)
• Gaps: 172/469 - (36%)

  Fly   129 TIDNFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTM 193
            ::.:|||.::.|:.::...|.:.|.||||||||||||||:.|||:.|||:|||||.:.||.|||:
  Rat    18 SLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTL 82

  Fly   194 HAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSGMAGAAS 258
            .||:|||:::||||||:|||.||..:||||||||||||:|:||
  Rat    83 RAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKP---------------------- 125

  Fly   259 SAASTSNTATSNAAASVAGNATATGNFVASGSTVPATTAGGLKLDTTGATNAAEVLGFSTVNSDI 323
                                                                             
  Rat   126 ----------------------------------------------------------------- 125

  Fly   324 FSAQLQQQQQQQQQHAAQQQQQQQQQQHHQAHPQQVQIIQQGAGGQQLQYFIALPSQQAAQLVQQ 388
                             .::|::.:|....|.|              :||:..|..|..|..||.
  Rat   126 -----------------PKRQEEVRQSVTPAEP--------------VQYYFTLAQQPTAVQVQG 159

  Fly   389 PQPAQNHLPINILSTQQPTQQLILTAGPNGQLTATPAPQTTAQQQTALLQNLAQQQQQHQQHQ-- 451
            .|..|.  ..:..:|.||.|  |:.|.|....|.....|....||..::|  ||.|.|.||.|
  Rat   160 QQQGQQ--TTSSTTTIQPGQ--IIIAQPQQGQTTPVTMQVGEGQQVQIVQ--AQPQGQAQQAQSG 218

  Fly   452 --QQIQLLQQVVTPTGELTNVPIAINASHLNLLQRLQ-------MQQQQQ------QQQQQQQQQ 501
              |.:|::||::|.|||:..:|:.:||..|..::..|       :|.|.|      ||..|.:.|
  Rat   219 TGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQ 283

  Fly   502 QQQQQVIIPTQLLTTQQLLQLGGAPTVAHQQQQQQQQHANLTQQSNASAVASGTPIFINSTMTGA 566
            |.|||.   :|....|||.|:         ||.......:|.|           |:||.|
  Rat   284 QGQQQF---SQFTDGQQLYQI---------QQVTMPAGQDLAQ-----------PMFIQS----- 320

  Fly   567 QAAATQAQQQQSAQ 580
               |.|....|:.|
  Rat   321 ---ANQPSDGQTPQ 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nf-YC	NP_572354.1	HAP5	<130..>246	CDD:227533	67/115 (58%)
Nfyc	NP_036998.1	HAP5	<17..>123	CDD:227533	64/104 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166354574
Domainoid	1	1.000	98	1.000	Domainoid score	I7027
eggNOG	1	0.900	-	-		E1_COG5208
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	169	1.000	Inparanoid score	I4056
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001272
OrthoInspector	1	1.000	-	-		oto97447
orthoMCL	1	0.900	-	-		OOG6_101766
Panther	1	1.100	-	-	LDO	PTHR10252
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X881
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.750