DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14439 and shiA

DIOPT Version :10

Sequence 1:NP_572347.1 Gene:CG14439 / 31614 FlyBaseID:FBgn0029898 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_416488.1 Gene:shiA / 946495 ECOCYCID:G7067 Length:438 Species:Escherichia coli


Alignment Length:445 Identity:102/445 - (22%)
Similarity:172/445 - (38%) Gaps:114/445 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 MFNRHELPTQCSAVMNETSCYALDFNGTGYCEWNYNGLGIDYQILAGPTFILIFTIAGVFMGFAA 122
            :|||...| |.|..|...:.:|.  .|.|:                     |...:.||..|...
E. coli    48 VFNREFFP-QVSPAMGTLAAFAT--FGVGF---------------------LFRPLGGVIFGHFG 88

  Fly   123 DKYNRVNMLTVCTVIFGIAMILQGTVKEY-----WQ---LVILRMIM---AAGESGCNPLATGIM 176
            |:..|..||.:...:.|||..|.|.:..:     |.   ||.||.|.   ..||.|    ...::
E. coli    89 DRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWG----GAALL 149

  Fly   177 S-DIFPEDKRALVMAIFNWGIYGGYGIAFPVGRYITKL--------NFWNLGWRVCYLGAGVLTV 232
            | :..|::|:    |.::.|:..|||:...:...:..|        .|.:.|||:.:|.:.||  
E. coli   150 SVESAPKNKK----AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVL-- 208

  Fly   233 IMAALTGTTLREPERKAIGEGDRQTSSGKPVSLWQ-VIKNPAMIMLMIAASIRHCGGMT------ 290
            ::.||......|...:...:...|.::.|.:.:.: ::::|...:.:||  :|.|..:|      
E. coli   209 VLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKIIA--LRLCELLTMYIVTA 271

  Fly   291 FAYNADLYYNTYFPDVDLGWWLFGVTIGIGSVGVVVGGI----------VSDKIVAKMGIRSRAF 345
            ||.|    |:|  .::.|...||      .::|::|||:          ::|:.       .|..
E. coli   272 FALN----YST--QNMGLPRELF------LNIGLLVGGLSCLTIPCFAWLADRF-------GRRR 317

  Fly   346 VLAVSQLIATLPAFGSVYFDPLWAMITLGLSYFFAEMWFGIVFAIVV--------EIVPLRVRSS 402
            |.....||.||.||  .:|..|.|.....: .||:.|...|...:||        |:.....|.|
E. coli   318 VYITGTLIGTLSAF--PFFMALEAQSIFWI-VFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYS 379

  Fly   403 TIGVFLFVMNNIGGNL-PILVDPVAKILGYRGSIMIFYAGFYGISSILFFITCFL 456
            ..||...|.:.:||.. |.:.          .:::.::||.:...:|.....|.:
E. coli   380 GAGVGYQVASVVGGGFTPFIA----------AALITYFAGNWHSVAIYLLAGCLI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14439NP_572347.1 MFS_spinster_like 67..457 CDD:340886 98/436 (22%)
shiANP_416488.1 PRK09952 1..438 CDD:182163 102/445 (23%)

Return to query results.
Submit another query.