DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14439 and sv2a

DIOPT Version :9

Sequence 1:NP_001188550.1 Gene:CG14439 / 31614 FlyBaseID:FBgn0029898 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_696434.2 Gene:sv2a / 568033 ZFINID:ZDB-GENE-131001-1 Length:733 Species:Danio rerio


Alignment Length:612 Identity:115/612 - (18%)
Similarity:183/612 - (29%) Gaps:259/612 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NRHELPTQCSAVMNETSCYALDFNGTGYCEWN-YNGLGIDYQILAGPTFILIFTI---------- 113
            ::.||..|...::.|  |      |.|..:|. |..||:.........|::.|.:          
Zfish   136 DQEELAQQYETILQE--C------GHGRFQWTLYFVLGLALMADGVEIFVVGFVLPSAEKDMCLS 192

  Fly   114 ----------------AGVFM-GFAADKYNRVNMLTVCTVIFGIAMILQGTVKEYWQLVILRMIM 161
                            .|.|: |..||:..|...|.:...|..:.......|:.|...:..|::.
Zfish   193 EPNKGMLGLIVYLGMMVGAFVWGGLADRIGRRQTLLISLSINSVFAFFSSFVQGYSSFLFCRLLS 257

  Fly   162 AAGESGCNPLATGIMSDIFPEDKR--------------ALVMAIFNWGIYGGYGIAFPVGRYITK 212
            ..|..|..|:.....|:...::||              .:..|...|.|...||.:|.:|   :.
Zfish   258 GVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMG---SA 319

  Fly   213 LNFWNLGWRVCYLGAGVLTV-IMAALT--------------------------GTTLRE---PER 247
            ..|.:  |||..|.....:| .:||||                          .|.:|.   |||
Zfish   320 YQFHS--WRVFVLVCAFPSVAAIAALTTMPESPRFYLENGKHDEAWMILKQVHDTNMRAKGYPER 382

  Fly   248 -------KAIGEGDRQTSSGKPVSLW-------------QVIKN--------------------- 271
                   |.:.:.|.....|...:.|             ||..|                     
Zfish   383 VFSVTTIKTVKQMDELVDMGGEATAWHQRWRIKLTNLFHQVWGNFLTVFNPEYRRITYMMMAVWF 447

  Fly   272 -------------PAMIMLM--------------------------------------------- 278
                         |.||..:                                             
Zfish   448 SMSFSYYGLTVWFPDMIKYLQKQEYSSRTKVFIKEKVEHVTFNFTLENQIHRNGEYFNNKFLNLK 512

  Fly   279 ------------------IAAS---IRHCGGM-TFAYNADLY----------YNTY--------- 302
                              |.:|   .|:|..: |..||.||:          .:|:         
Zfish   513 MKSMVFEDSLFEECYFEDITSSNTFFRNCTFISTLFYNTDLFKYRLINSKLINSTFLHNKEGCML 577

  Fly   303 -FPDVDLGWWLFGVTIGIGSVGVVVGGIVSDKIVAKMGIRSRAFVLAVSQLIATLPAFGSVYFDP 366
             |.|.:..:.::.|:. :|::.|:.|.|||..::.|:|   |..:||.|.:|:.:..|...:.:.
Zfish   578 DFSDENNAYMIYFVSF-LGTLAVLPGNIVSALLMDKIG---RLRMLAGSSVISCVSCFFLSFGNS 638

  Fly   367 LWAMITL-----GLSYFFAEMWFGIVFAIVVEIVPLRVRSSTIGVFLFVMNNIGGNLPILVDPVA 426
            ..|||.|     |:|   ...| ..:..:.||:.|...|::..| ||..:..:           |
Zfish   639 ESAMIALLCLFGGIS---IASW-NALDVLTVELYPSDKRTTAFG-FLNALCKL-----------A 687

  Fly   427 KILGYRGSIMIFYAGFYGISS---ILF 450
            .:||    |.||.: |.||:.   |||
Zfish   688 AVLG----ISIFQS-FVGITKAVPILF 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14439NP_001188550.1 MFS_1 94..416 CDD:284993 94/538 (17%)
MFS 107..452 CDD:119392 104/564 (18%)
sv2aXP_696434.2 synapt_SV2 1..733 CDD:130366 115/612 (19%)
MFS 162..725 CDD:119392 106/578 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.