DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-ASHI and Ndufb8

DIOPT Version :10

Sequence 1:NP_572338.1 Gene:ND-ASHI / 31604 FlyBaseID:FBgn0029888 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001099830.1 Gene:Ndufb8 / 293991 RGDID:1309129 Length:186 Species:Rattus norvegicus


Alignment Length:152 Identity:59/152 - (38%)
Similarity:81/152 - (53%) Gaps:18/152 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PVVARQAIRSMAGWNKDYKPGPYPQTEKERLAAAKKYYLLPEEYKPYADDGLGYGDYPKLGYGLG 83
            |:.||:|..    ..||..||.||:|.:||.||||||.:..|:|:||.|||:||||||.|. ...
  Rat    23 PLEARRAFH----MTKDMMPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPMLP-NRS 82

  Fly    84 VEAKDSYYPWDYPEHKRNQHEPISADHDLYSEDRWSQAEPP-----RYSNAYYFACFLGVMSGCL 143
            ...:|.:|.||:|:.:.|..|||..|.|:|..:|...:..|     ...:.:.|..|:..|    
  Rat    83 QHERDPWYEWDHPDLRLNWGEPIHWDLDMYIRNRVDTSPTPVSWDVMCRHLFGFVAFMVFM---- 143

  Fly   144 ALYYWLDDK-KMYRPVAAKQYP 164
               :|:.|. ..|:||..||||
  Rat   144 ---FWVGDMFPSYQPVGPKQYP 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-ASHINP_572338.1 NDUF_B8 26..164 CDD:428637 53/143 (37%)
Ndufb8NP_001099830.1 NDUF_B8 21..186 CDD:428637 59/152 (39%)

Return to query results.
Submit another query.