back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ctr1A and slc31a1

DIOPT Version :9

Sequence 1:	NP_001245552.1	Gene:	Ctr1A / 31601	FlyBaseID:	FBgn0062413	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	NP_991280.3	Gene:	slc31a1 / 403028	ZFINID:	ZDB-GENE-040415-3	Length:	188	Species:	Danio rerio

Alignment Length:	236	Identity:	89/236 - (37%)
Similarity:	121/236 - (51%)	Gaps:	53/236 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 VDHSMHHDHVGMHHDHSGIPAATASPMDAASMFDLIPDTSDLQASHAGHAAHGAHNHGGGSGTGM 75
            :|.|..|.||    :.:.:|:               |.:.|    |.||.....:.||
Zfish     1 MDSSHSHHHV----EETTMPS---------------PASDD----HGGHLTTSGNGHG------- 35

  Fly    76 EH--MMPMAFHFGY-NETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLE 137
            :|  ||.|.|:||| |..:||:...|.|...:.|:.|.:||||::|||||..||.|..:....:.
Zfish    36 DHMMMMQMTFYFGYKNVELLFAGLVINTPGEMAGACIGVFLLAVLYEGLKIGREVLLRRNQVNVR 100

  Fly   138 YR--PVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVVHKQPPSMLSINHLLQTLLHVLQVTLSFLL 200
            |.  ||.|           |.........:.||:       .|||:.|.||||||::||.:|:.|
Zfish   101 YNSMPVPG-----------SDGTVLMETHKTVGQ-------RMLSMAHFLQTLLHIIQVVVSYFL 147

  Fly   201 MLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIVDVTEHCH 241
            ||:|||||.:||:.|..||.:|||||.|||:|:||:|||||
Zfish   148 MLVFMTYNGYLCIAVAAGAGLGYFLFSWKKAVVVDITEHCH 188

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ctr1A	NP_001245552.1	Ctr	81..226	CDD:461194	60/147 (41%)
slc31a1	NP_991280.3	None

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	-	-
eggNOG	1	0.900	-	-
Hieranoid	1	1.000	-	-