DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctr1A and slc31a1

DIOPT Version :10

Sequence 1:NP_001245552.1 Gene:Ctr1A / 31601 FlyBaseID:FBgn0062413 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_991280.3 Gene:slc31a1 / 403028 ZFINID:ZDB-GENE-040415-3 Length:188 Species:Danio rerio


Alignment Length:236 Identity:89/236 - (37%)
Similarity:121/236 - (51%) Gaps:53/236 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VDHSMHHDHVGMHHDHSGIPAATASPMDAASMFDLIPDTSDLQASHAGHAAHGAHNHGGGSGTGM 75
            :|.|..|.||    :.:.:|:               |.:.|    |.||.....:.||       
Zfish     1 MDSSHSHHHV----EETTMPS---------------PASDD----HGGHLTTSGNGHG------- 35

  Fly    76 EH--MMPMAFHFGY-NETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLE 137
            :|  ||.|.|:||| |..:||:...|.|...:.|:.|.:||||::|||||..||.|..:....:.
Zfish    36 DHMMMMQMTFYFGYKNVELLFAGLVINTPGEMAGACIGVFLLAVLYEGLKIGREVLLRRNQVNVR 100

  Fly   138 YR--PVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVVHKQPPSMLSINHLLQTLLHVLQVTLSFLL 200
            |.  ||.|           |.........:.||:       .|||:.|.||||||::||.:|:.|
Zfish   101 YNSMPVPG-----------SDGTVLMETHKTVGQ-------RMLSMAHFLQTLLHIIQVVVSYFL 147

  Fly   201 MLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIVDVTEHCH 241
            ||:|||||.:||:.|..||.:|||||.|||:|:||:|||||
Zfish   148 MLVFMTYNGYLCIAVAAGAGLGYFLFSWKKAVVVDITEHCH 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctr1ANP_001245552.1 Ctr 81..226 CDD:461194 60/147 (41%)
slc31a1NP_991280.3 None

Return to query results.
Submit another query.