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Protein Alignment Ctr1A and Y58A7A.1

DIOPT Version :9

Sequence 1:	NP_001245552.1	Gene:	Ctr1A / 31601	FlyBaseID:	FBgn0062413	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	NP_001256056.1	Gene:	Y58A7A.1 / 190381	WormBaseID:	WBGene00021975	Length:	163	Species:	Caenorhabditis elegans

Alignment Length:	219	Identity:	59/219 - (26%)
Similarity:	87/219 - (39%)	Gaps:	74/219 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 VDHSMHHDHVGMHHDHSGIPAATASPMDAASMFDLIPDTSDLQASHAGHAAHGAHNHGGGSGTGM 75
            :|||.|      ||.|.|....||.....:|
Worm     1 MDHSQH------HHVHKGTIGNTAVAQTKSS---------------------------------- 25

  Fly    76 EHMM---PMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYLFWKTYNLLE 137
            :|||   .|:||||..|||||.:|..||..|:..:.....|||.:.|.|:::|:|.  |....|.
Worm    26 DHMMMNHAMSFHFGTEETILFDFWKTETAVGIAVACFITVLLAFLMETLRFFRDYR--KAQTQLH 88

  Fly   138 YRPVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVVHKQPPSMLSINHLLQTLLHVLQVTLSFLLML 202
            ..|::...|...:|::                             .|:..||.:.|:|:::.|||
Worm    89 QPPISPEDRLKRSPQL-----------------------------DLIDPLLQLFQLTIAYFLML 124

  Fly   203 IFMTYNVWLCLMVVLGAAVGYFLF 226
            ||||:|.:||...|:|..|.:.|:
Worm   125 IFMTFNAYLCFFTVVGEVVCHLLY 148

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ctr1A	NP_001245552.1	Ctr	81..226	CDD:461194	44/144 (31%)
Y58A7A.1	NP_001256056.1	Ctr	34..147	CDD:461194	44/143 (31%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.