DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc7 and Cdk6

DIOPT Version :9

Sequence 1:NP_727103.1 Gene:Cdc7 / 31598 FlyBaseID:FBgn0028360 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001178790.1 Gene:Cdk6 / 114483 RGDID:621121 Length:326 Species:Rattus norvegicus


Alignment Length:554 Identity:104/554 - (18%)
Similarity:145/554 - (26%) Gaps:279/554 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 GKLFDVHSRIGNGTFSTVLLGTLR---RESHLPDSLRRKFAIKHHIPT-SHPDRIMKELQCMTKM 184
            ||:|........|.|  |.|..:|   .|..:|.|..|:.|:..|:.| .||             
  Rat    25 GKVFKARDLKNGGRF--VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP------------- 74

  Fly   185 GGKENVVGIH--CCM-RYDASAAFVMPFMAHDRFQDFYTRMD-VPE-------IRQYMRNLLVAL 238
                |||.:.  |.: |.|......:.|...|  ||..|.:| |||       |:..|..||..|
  Rat    75 ----NVVRLFDVCTVSRTDRETKLTLVFEHVD--QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133

  Fly   239 RHVHKFDVIHRDVKPSNFLYNRRRREFLLVDFGLAQHVNPPAARSSGSAAAIAAANNKNNNNNNN 303
            ..:|...|:|||:||.|.|.. ...:..|.|||||                              
  Rat   134 DFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLA------------------------------ 167

  Fly   304 NNSKRPRERESKGDVQQIALDAGLGGAVKRMRLHEESNKMPLKPVNDIAPSDAPEQSVDGSNHVQ 368
                                           |::  |.:|.|..|                    
  Rat   168 -------------------------------RIY--SFQMALTSV-------------------- 179

  Fly   369 PQLVQQEQQQLQPQQQQQQQQQQQQSQQQQQPQQQSQQQHPQRQPQLAQMDQTASTPSGSKYNTN 433
                                                                             
  Rat   180 ----------------------------------------------------------------- 179

  Fly   434 RNVSAAAANNAKCVCFANPSVCLNCLMKKEVHASRAGTPGYRPPEVLLKYPDQTTAVDVWAAGVI 498
                                               ..|..||.|||||: ....|.||:|:.|.|
  Rat   180 -----------------------------------VVTLWYRAPEVLLQ-SSYATPVDLWSVGCI 208

  Fly   499 FLSIMSTVYPFFKAPNDFIALAEIVTIFG--DQAIRKTALALDRMITLSQRSRPLNLRKLCLRFR 561
            |..:... .|.|:..:|...|.:|:.:.|  .:......:||.|....|:.::|:.      :| 
  Rat   209 FAELFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIE------KF- 265

  Fly   562 YRSVFSDAKLLKSYESVDGSCEVCRNCDQYFFNCLCEDSDYLTEPLDAYECFPPSAYDLLDRLLE 626
                                               ..|.|.|.:             |||.:.|.
  Rat   266 -----------------------------------VTDIDELGK-------------DLLLKCLT 282

  Fly   627 INPHKRITAEEALKHPFFTAAEEAEQTEQDQLAN 660
            .||.|||:|..||.||:|...|..:......|::
  Rat   283 FNPAKRISAYGALNHPYFQDLERYKDNLHSHLSS 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc7NP_727103.1 STKc_Cdc7 125..644 CDD:270921 100/535 (19%)
PKc_like <474..644 CDD:304357 43/171 (25%)
PKc_like <616..675 CDD:304357 17/45 (38%)
Cdk6NP_001178790.1 STKc_CDK6 11..300 CDD:270846 101/536 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.