DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc7 and cdk13

DIOPT Version :9

Sequence 1:NP_727103.1 Gene:Cdc7 / 31598 FlyBaseID:FBgn0028360 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_002940845.2 Gene:cdk13 / 100489599 XenbaseID:XB-GENE-6040279 Length:1391 Species:Xenopus tropicalis


Alignment Length:608 Identity:114/608 - (18%)
Similarity:182/608 - (29%) Gaps:284/608 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RTTKQARNKSEEAI-----NDLLTRIPDIGK----LFDVHSRIGNGTF------------STVLL 143
            |...|:|||....|     .::|.:..|.||    .||:...||.||:            ..|.|
 Frog   562 RKKNQSRNKRRPKICGPRCGEILEKEIDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGEMVAL 626

  Fly   144 GTLRRESH---LPDSLRRKFAIKHHIPTSHPDRI-MKELQCMTKMGGKENVVGIHCCMRYDASAA 204
            ..:|.::.   .|.:..|:..|...:  :|...| |||:     :..||:.:.    .:.|..|.
 Frog   627 KKVRLDNEKEGFPITAIREIKILRQL--NHQSIINMKEI-----VTDKEDALD----FKKDKGAF 680

  Fly   205 F-VMPFMAHD---RFQDFYTRMDVPEIRQYMRNLLVALRHVHKFDVIHRDVKPSNFLYNRRRREF 265
            : |..:|.||   ..:......:...|:.:||.|:..|.:.||.:.:|||:|.||.|.| .|.:.
 Frog   681 YLVFEYMDHDLMGLLESGLVHFNEHHIKSFMRQLMEGLDYCHKRNFLHRDIKCSNILLN-NRGQI 744

  Fly   266 LLVDFGLAQHVNPPAARSSGSAAAIAAANNKNNNNNNNNNSKRPRERESKGDVQQIALDAGLGGA 330
            .|.|||||                                                         
 Frog   745 KLADFGLA--------------------------------------------------------- 752

  Fly   331 VKRMRLHEESNKMPLKPVNDIAPSDAPEQSVDGSNHVQPQLVQQEQQQLQPQQQQQQQQQQQQSQ 395
                ||:                                                        |.
 Frog   753 ----RLY--------------------------------------------------------SS 757

  Fly   396 QQQQPQQQSQQQHPQRQPQLAQMDQTASTPSGSKYNTNRNVSAAAANNAKCVCFANPSVCLNCLM 460
            ::.:|.                              ||:.:                        
 Frog   758 EESRPY------------------------------TNKVI------------------------ 768

  Fly   461 KKEVHASRAGTPGYRPPEVLLKYPDQTTAVDVWAAGVIFLSIMSTVYPFFKAPNDFIALAEIVTI 525
                      |..|||||:||.....:.|:|||:.|.| |..:.|..|.|:| |..:|..|::: 
 Frog   769 ----------TLWYRPPELLLGEERYSPAIDVWSCGCI-LGELFTKKPIFQA-NQELAQLELIS- 820

  Fly   526 FGDQAIRKTALALDRMITLSQRSRPLNLRKLCLRFRYRSVFSDAKLLKSYESVDGSCEVCRNCDQ 590
                                         ::| .....:|:.|...|.                 
 Frog   821 -----------------------------RMC-GSPCPAVWPDVIKLP----------------- 838

  Fly   591 YFFNCLCEDSDYLTEPLDAYECFPPSAYDLLDRLLEINPHKRITAEEALKHPFFTAAEEAEQTEQ 655
             :||.:.....|..:..:.:...|.:|.||.|.:|.::|:||.|||:||...|....:.::.|..
 Frog   839 -YFNTMKPKKQYRRKLREEFVFIPNAALDLFDHMLALDPNKRCTAEQALLCEFLRDVDPSKMTPP 902

  Fly   656 D--------QLANGTPRKMRRQR 670
            |        :|.:   :|.|||:
 Frog   903 DLPLWQDCHELWS---KKRRRQK 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc7NP_727103.1 STKc_Cdc7 125..644 CDD:270921 97/542 (18%)
PKc_like <474..644 CDD:304357 42/169 (25%)
PKc_like <616..675 CDD:304357 21/63 (33%)
cdk13XP_002940845.2 STKc_CDK12 590..891 CDD:270847 98/544 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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