DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and AT3G06480

DIOPT Version :10

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_187299.1 Gene:AT3G06480 / 819825 AraportID:AT3G06480 Length:1088 Species:Arabidopsis thaliana


Alignment Length:720 Identity:181/720 - (25%)
Similarity:317/720 - (44%) Gaps:115/720 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QSRSLKSSSSVLSSKFVTKRLFTIQHGIEGQKPNFKIRSESFS------GPHSAGGFSKSTRESR 105
            |.:.:::..|.:..:...:...:.||.: |.:|:.:.:....|      |||  |....|.:|..
plant   157 QQQGMQNQHSQMPQQLSHQYAHSQQHYM-GFRPHMQTQGLQNSHQTPQGGPH--GQQFPSQQEYN 218

  Fly   106 SKSRSMGNGKFRGKSHLRSSSESAHSSGSESSSSDSNSGSSSDSDSTTGSSSHGSDTGERPRMRS 170
            |.:......:|.|..  ::.....|...||.|.|.:....::.:...|.::...:.....|:..:
plant   219 SLAPKREGDEFHGGK--KTGFSQPHLPNSERSPSQNTHFEANAASQKTNANLAMAQKCNGPQANA 281

  Fly   171 AVFR--------IHETW--QSPNS--------------FKAVKTSRENKESRSRSSSLPQKR--- 208
            ||.:        ||:..  ::||.              |::..|...|.:||..:.|....|   
plant   282 AVTQFQQPGANLIHQQLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEV 346

  Fly   209 -------FCPSKTQND--LTYGSPEPKSPS--NRGRNSW-RVGMRTPWKKSQSRSMSCSSIQKIL 261
                   ..|:....|  ::.|.|....|:  ..|..:: ..|...|              .|.|
plant   347 PVRGAQPLHPAAMPKDIRISGGPPTNADPAMGQTGHGTYGHAGPAFP--------------NKSL 397

  Fly   262 VSRSFTRSRS-PHRNTLCYQDQSKNPSRPSNYNTWKQPMDEVYNNAANYRKRHNITLTSWNMRNL 325
            |...|..|.. ||.:.:                       |:      |||:|.:|.|.   .|:
plant   398 VRPHFVTSPDVPHLSPV-----------------------EI------YRKQHEVTTTG---ENI 430

  Fly   326 PEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIM 390
            |.|.::||.||....||::|...|:..|||||||||.||.:.::||.|:..|:|||||||:|..:
plant   431 PAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495

  Fly   391 KMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNSQWQG------HAE 449
            .:.:.|.  ..:.||.||||...||.|..:|.|.|.:.....:...||.|.:. :|      ...
plant   496 LLRHCRN--DSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAP-KGPQLKELERG 557

  Fly   450 CDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCRLRPHAQLIVSST 514
            .|::||:.|||..:::.|  :::.::.:.||||..|||:|:|.|..|.:::..:.|..|.::.:.
plant   558 ADIVVATPGRLNDILEMK--MIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 620

  Fly   515 SWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELTAIYDTSDIP 579
            :|...::::|:..|.....:.:|.::.:... :.|.|.||||..:.|..||.:    |..:.:..
plant   621 TWPKEVRKIASDLLVNPVQVNIGRVDELAAN-KAITQYVEVVPQMEKERRLEQ----ILRSQERG 680

  Fly   580 GKVVIYVKRQKVVEELVDLIRNCVPCEGIHGGRTAQENQGIIHDFGTGAYNIIVATQMTSNCLDV 644
            .||:|:...:::.:.|...:........|||.:|..|...:::.|.:|...:::||.:.:..||:
plant   681 SKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDI 745

  Fly   645 PGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVTEVVDFLKICKQEIGPH 709
            ..||.|||||||..::.||.|:.|||  .........:|||..::|...:::..|:...|::.|.
plant   746 KDIRVVINYDFPTGVEDYVHRIGRTG--RAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQ 808

  Fly   710 LLQLA 714
            :..:|
plant   809 VRDIA 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 DEAD-like_helicase_N <310..720 CDD:475120 128/411 (31%)
AT3G06480NP_187299.1 WW 22..52 CDD:459800
DEAD-like_helicase_N 402..814 CDD:475120 134/456 (29%)
Blue background indicates that the domain is not in the aligned region.

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