DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14443 and pths

DIOPT Version :10

Sequence 1:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_610090.1 Gene:pths / 35379 FlyBaseID:FBgn0032919 Length:507 Species:Drosophila melanogaster


Alignment Length:439 Identity:93/439 - (21%)
Similarity:178/439 - (40%) Gaps:85/439 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 EPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMK 391
            |..|:::..|.|..:.|..::..:..|:.||.:...:|.:||:::.::..|:|||..:.||.:  
  Fly    58 EQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPIL-- 120

  Fly   392 MHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNSQW--QG-------H 447
                ..|:::.:....|:|...||.|..:..:.....:.:.::...::|....  ||       |
  Fly   121 ----HALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH 181

  Fly   448 AECDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCRLRPHAQLIVS 512
                :::|:.|||:..::|.|. ..|:...|||:|..||::::..|..:.::|..|....:..:.
  Fly   182 ----IIIATPGRLVDHLENMKG-FNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLF 241

  Fly   513 STSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELTAIYDTSD 577
            |.:.:..:|::....|....                   :|||.|....||:|.:..        
  Fly   242 SATMTKKVKKLQRASLKDPV-------------------KVEVSNKYQTVEQLQQSY-------- 279

  Fly   578 IPGKVVIYVKRQKV--VEELVDLIRN-----CVPCEG-----------------IHGGRTAQENQ 618
                :.|.||.:.|  |..|.:|..|     |..|..                 :||..:..:..
  Fly   280 ----LFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 340

  Fly   619 GIIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISF 683
            ..::.|.....:|:::|.:.|..||:|.:..|:|:|.|.:...|:.|:.||.  ...|:.:.|:.
  Fly   341 AALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTA--RAGRSGKAITL 403

  Fly   684 FTMANYKLVTEVVDFLKICKQEIGPHL-LQLAEEKMFGPRQRRRHRPQR 731
            .:..:.:|...:...|       |..| |...||......|.|....||
  Fly   404 VSQYDIELYQRIEHLL-------GKQLTLYKCEEDEVMALQERVAEAQR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14443NP_572330.2 DEAD-like_helicase_N <310..720 CDD:475120 89/426 (21%)
pthsNP_610090.1 SrmB 62..480 CDD:440279 91/435 (21%)

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