DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pat1 and Nphp3

DIOPT Version :10

Sequence 1:NP_572328.1 Gene:Pat1 / 31593 FlyBaseID:FBgn0029878 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_082997.3 Gene:Nphp3 / 74025 MGIID:1921275 Length:1325 Species:Mus musculus


Alignment Length:589 Identity:127/589 - (21%)
Similarity:215/589 - (36%) Gaps:138/589 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 ENYVSRYEVVAGHEEEELESSMDTVEDRSTEFSSLYTYDSESTNADSISDFNDEFS-ADIGSIVG 177
            ::.||.|::|..|..|.:.|..|  ::..|:...|........:...:.:...|.| ..:.|||.
Mouse   738 QDTVSLYKLVLHHVRESMPSDRD--KEWMTQILCLINVSHNGVSESELMELYPEMSWLSLTSIVH 800

  Fly   178 LPHR-RATQEELDAINDSGLEELSAVELQVIDLGLRLGS--------FLSEAGWMQESITVLACL 233
            ..|: .........:....|:....|.||.::....:.|        |.|:..  |:.:|..:. 
Mouse   801 SLHKMHLLTYSCGLLRFQHLQAWETVRLQYLEDPALVSSYREKLISYFASQLS--QDRVTWRSA- 862

  Fly   234 NVRLKDLPTHKHWL-------QFRLDCLQRLLYAESAHCNFKEAEKTYAELMGLNKWLNKSVPNQ 291
                .:||    ||       |....||..||.|::.   :|...  :|||  |:.|       |
Mouse   863 ----DELP----WLFQQQGSKQKLHSCLLNLLVAQNL---YKRGH--FAEL--LSYW-------Q 905

  Fly   292 LVAITYSQISAMYF-ARNEYKNSHLWSGLAMRFLKGYANPRTIIDVLRQAAKACVVKRDFARANL 355
            .|......::..|| :..:|:||           :|..|...:.|:.....:       |.:...
Mouse   906 FVGKDKGAMATEYFESLKQYENS-----------EGEENMLCLADLYETLGR-------FLKDLG 952

  Fly   356 LICQAV---RRAREY----FGPTHQKYGDALLDYGFFLLNVDSVFQSVNIYKEALAVRRGIFGNM 413
            |:.|||   :|:.|.    ..|.|.:...:|.......:.......:..:||:||.:....:|..
Mouse   953 LLSQAVVPLQRSLEIRETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGAD 1017

  Fly   414 NFHVAIAHEDLSYAYYVHEYSTGDFSCAQDHVDKAVNIMQHLVPSNHLMLASAKRVKALLLEEIA 478
            :.|.|...|.|:..|:           .|:..::|    :|....:.::...|.|.|..|.....
Mouse  1018 HPHAARELEALATLYH-----------KQNKYEQA----EHFRKKSVIIRQQATRRKGSLYGFAL 1067

  Fly   479 LDKMADGIDEEDLLLQSEELHNFALLLSLQVFGEVNVQTAKHYGNLGRLYQTMNRFEEAERMHKK 543
            |.:.|         ||.|||          ..|:...:.|:....||.||...|..|.||:..|:
Mouse  1068 LRRRA---------LQLEEL----------TLGKDKPENARTLNELGVLYFLQNNLETAEQFLKR 1113

  Fly   544 AIKIKSELLGHFDYEVGLSIGHLASLYNYQMKKYRDAEQLYMRSIDISLRLFGNSYSGLEYDYLG 608
            :::::..:||....:...|:.:||:|.| :.|:|..||:||.|::||..|.....:..|.|....
Mouse  1114 SLEMRERVLGPDHPDCAQSLNNLAALCN-EKKQYEKAEELYERALDIRRRALAPDHPSLAYTVKH 1177

  Fly   609 LCHVYETLHNFEKYLKYAHKLENWQMLRGQNLTQNKSSYPAIEVDYSIEEVKAKYFSMCASKKSA 673
            |..:|:.....:|                        :.|..|:   ..|::.|.|.      ..
Mouse  1178 LAILYKKTGKVDK------------------------AVPLYEL---AVEIRQKSFG------PK 1209

  Fly   674 HPSV 677
            ||||
Mouse  1210 HPSV 1213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pat1NP_572328.1 Spy 471..>628 CDD:443119 41/156 (26%)
TPR_12 516..590 CDD:315987 24/73 (33%)
TPR repeat 518..546 CDD:276809 10/27 (37%)
TPR repeat 559..590 CDD:276809 12/30 (40%)
TPR repeat 603..628 CDD:276809 4/24 (17%)
Nphp3NP_082997.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
OmpH 120..>199 CDD:461098
TPR 1 467..500
TPR 2 881..914 13/46 (28%)
TPR 3 916..937 7/31 (23%)
TPR 4 938..971 8/39 (21%)
TPR repeat 938..966 CDD:276809 7/34 (21%)
FxSxx_TPR <946..1284 CDD:468560 76/343 (22%)
TPR repeat 976..1009 CDD:276809 6/32 (19%)
TPR 5 980..1013 5/32 (16%)
TPR repeat 1022..1074 CDD:276809 13/75 (17%)
TPR 6 1022..1055 7/47 (15%)
TPR 7 1088..1121 10/32 (31%)
TPR repeat 1088..1116 CDD:276809 10/27 (37%)
TPR 8 1130..1163 14/33 (42%)
TPR repeat 1130..1158 CDD:276809 12/28 (43%)
TPR repeat 1168..1201 CDD:276809 7/59 (12%)
TPR 9 1172..1205 7/59 (12%)
TPR 10 1214..1247 127/589 (22%)
TPR repeat 1214..1242 CDD:276809 127/589 (22%)
TPR 11 1256..1289
TPR repeat 1256..1284 CDD:276809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1293..1325
Blue background indicates that the domain is not in the aligned region.

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