DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and AT5G59000

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_200708.1 Gene:AT5G59000 / 836017 AraportID:AT5G59000 Length:231 Species:Arabidopsis thaliana


Alignment Length:192 Identity:42/192 - (21%)
Similarity:65/192 - (33%) Gaps:67/192 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SHHQHVLSEAAALRLINGLESAGNATMPLGAQPPQSA-------AAEAICSSQIVASAHGTPTAS 59
            |||          .|.|..:|           ||.|.       :::....||:...:.|.| |.
plant     8 SHH----------HLANPTDS-----------PPYSVEISIDGDSSDWDSLSQVDLESGGVP-AP 50

  Fly    60 TAALEISSARQRMLRSHLQESLHSANESGNSCRICRW-----------------------NRNDM 101
            ...|. |..::|..|...:.......:.|..||||..                       :..|.
plant    51 EKQLH-SGGKKRRTRRRKRRKKKKKKKGGRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDE 114

  Fly   102 E-------------IIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAV-FNIAEERAS 149
            |             .::..|:|||.:|..|.||.:.|...:.:..||||.|: .|:|.|:::
plant   115 EEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSN 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 18/82 (22%)
AT5G59000NP_200708.1 RINGv 80..164 CDD:128983 18/83 (22%)

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