DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and marchf2

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:XP_017949123.1 Gene:marchf2 / 549760 XenbaseID:XB-GENE-945914 Length:258 Species:Xenopus tropicalis


Alignment Length:185 Identity:43/185 - (23%)
Similarity:76/185 - (41%) Gaps:27/185 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SARQRMLRSHLQESLHSANESGNSCRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRD 131
            :|:...|.|.:.::|.:.:: |..||||....|...::. ||:|.|::|.:|..||::|:.....
 Frog    53 TAKDGQLLSTVIKALGTQSD-GPICRICHEGGNGERLLS-PCDCTGTLGTVHKTCLEKWLSSSNT 115

  Fly   132 NRCEICNAVFNIAEERASLKQMI---------RTFCCGRCCGLIVKHLLFSASLMPLAHIILQQV 187
            :.||:|:..|.:......:.:.:         ||..|...|.|.:         .|||.|   ..
 Frog   116 SYCELCHTEFAVERRPRPVTEWLKDPGPRNEKRTLFCDMVCFLFI---------TPLAAI---SG 168

  Fly   188 LQCMDNMNQGSTDQLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNILSHW 242
            ..|:    :|:.|.|.......|...:..:.|||..:..:....|.....:.|.|
 Frog   169 WLCL----RGAQDHLQFNSRLEAVGLIALTIALFTIYVLWTLVSFRYHCQLYSEW 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 16/46 (35%)
marchf2XP_017949123.1 RING_CH-C4HC3_MARCH2 74..125 CDD:319722 17/51 (33%)

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