DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and Marchf11

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001095298.1 Gene:Marchf11 / 499558 RGDID:1559945 Length:398 Species:Rattus norvegicus


Alignment Length:130 Identity:37/130 - (28%)
Similarity:49/130 - (37%) Gaps:37/130 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ESAGNATMPLGAQPPQSAAAE-------------AICSSQIVASAHGTPTASTAALEISSARQRM 72
            |:|.....|  |:|...|..|             ::|||:  :|:.|           .|..|| 
  Rat   106 EAAAGKGSP--AEPEAGACGEGERRGTGDQPETRSVCSSR--SSSSG-----------GSGDQR- 154

  Fly    73 LRSHLQESLHSANESGNSCRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEIC 137
                   |.|........|:||.......|::. ||.|.|||.|.|..||.:||..|....||:|
  Rat   155 -------SGHQHQHHQPICKICFQGAEQGELLN-PCRCDGSVRYTHQLCLLKWISERGSWTCELC 211

  Fly   138  137
              Rat   212  211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 20/47 (43%)
Marchf11NP_001095298.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..158 16/74 (22%)
RING_CH-C4HC3_MARCH11 164..223 CDD:438460 20/49 (41%)
YXXL motif 367..370
PDZ-binding 395..398
Blue background indicates that the domain is not in the aligned region.

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