DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and marchf3

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001007499.1 Gene:marchf3 / 493225 XenbaseID:XB-GENE-491983 Length:251 Species:Xenopus tropicalis


Alignment Length:203 Identity:50/203 - (24%)
Similarity:84/203 - (41%) Gaps:41/203 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNS---CRICRWNRNDMEIIK 105
            |||.:    :|.|   ...::: ||:...|.|.:..:|  ..:|.|.   ||||.......:::.
 Frog    29 CSSLV----NGQP---QYVMQV-SAKDGQLLSTVVRTL--TTQSFNDRPMCRICHEGSTQEDLLS 83

  Fly   106 CPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNIAEERASLKQMI---------RTFCCGR 161
             ||.|.|::|.||..||:.|:.....:.||:|:..|::..:...|.:.:         ||.....
 Frog    84 -PCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFSVERKPRPLVEWLRNPGPQHEKRTLFGDM 147

  Fly   162 CCGLIVKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTDQLTVQEVFVASCALLTSSALF--FHF 224
            .|.|.:         .|||.|   ....|:    :|:.|.|.......|...:..:.|||  :.|
 Frog   148 VCFLFI---------TPLATI---SGWLCL----RGAVDHLHFSSRLEAVGLIALTVALFTIYLF 196

  Fly   225 FEFVTTRF 232
            :..|:.|:
 Frog   197 WTLVSFRY 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 16/46 (35%)
marchf3NP_001007499.1 RING_Ubox 63..118 CDD:473075 18/55 (33%)

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