DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17717 and Marchf4

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001414713.1 Gene:Marchf4 / 367295 RGDID:1590797 Length:409 Species:Rattus norvegicus


Alignment Length:128 Identity:38/128 - (29%)
Similarity:51/128 - (39%) Gaps:15/128 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ESAGNATMPLGAQPPQSAAAEAICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSAN 85
            |:.|..|.||...||...:.|.......:.     |.||.    :|||..........|..:|..
  Rat    96 EAVGRETPPLPPPPPLPPSVEDDWDGPAIG-----PPASL----LSSASSDEFCKEKTEDCYSLG 151

  Fly    86 --ESGNS---CRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNI 143
              :||..   ||||.......|::. ||.|.|||...|..||.:||..|....||:|...:::
  Rat   152 SLDSGMRTPLCRICFQGPEQGELLS-PCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHV 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 19/46 (41%)
Marchf4NP_001414713.1 None

Return to query results.
Submit another query.