DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and Marchf3

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001361156.1 Gene:Marchf3 / 320253 MGIID:2443667 Length:253 Species:Mus musculus


Alignment Length:214 Identity:50/214 - (23%)
Similarity:88/214 - (41%) Gaps:43/214 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SAAAEAI-----CSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGN--SCRIC 94
            |:||..:     |.|.:    :|.|   ...::: ||:...|.|.:..:|.:.:...:  .||||
Mouse    18 SSAAPVVKTVEDCGSLV----NGQP---QYVMQV-SAKDGQLLSTVVRTLATQSPFNDRPMCRIC 74

  Fly    95 RWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFNIAEERASLKQMI----- 154
            ....:..:::. ||.|.|::|.||..||:.|:.....:.||:|:..|.:..:...|.:.:     
Mouse    75 HEGSSQEDLLS-PCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAVERKPRPLVEWLRNPGP 138

  Fly   155 ----RTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTDQLTVQEVFVASCALL 215
                ||......|.|.:         .|||.|   ....|:    :|:.|.|.......|...:.
Mouse   139 QHEKRTLFGDMVCFLFI---------TPLATI---SGWLCL----RGAVDHLHFSSRLEAVGLIA 187

  Fly   216 TSSALF--FHFFEFVTTRF 232
            .:.|||  :.|:..|:.|:
Mouse   188 LTVALFTIYLFWTLVSFRY 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 16/46 (35%)
Marchf3NP_001361156.1 RING_CH-C4HC3_MARCH3 65..120 CDD:438459 17/55 (31%)

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