DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17717 and marchf5

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001116950.1 Gene:marchf5 / 100144728 XenbaseID:XB-GENE-946356 Length:283 Species:Xenopus tropicalis


Alignment Length:147 Identity:34/147 - (23%)
Similarity:56/147 - (38%) Gaps:54/147 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 SCRIC----------RWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHR-RDN-----RCEICN 138
            ||.:|          .|.|        ||.|:||..::|..||:||:..: |.|     .|..||
 Frog    16 SCWVCFATDEDDRTAEWVR--------PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCN 72

  Fly   139 A--------------VFNIAEERASLKQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQ 189
            |              |.::|:      ::|...|.....|::|..:.::|  :....:.:.||: 
 Frog    73 AEYLIVFPNLGPVVYVLDLAD------RLISKACPFAAAGIMVGSIYWTA--VTYGAVTVMQVV- 128

  Fly   190 CMDNMNQGSTDQLTVQE 206
                   |..:.|.|.|
 Frog   129 -------GHKEGLDVME 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 17/62 (27%)
marchf5NP_001116950.1 RING_CH-C4HC3_MARCH5 15..75 CDD:438361 21/66 (32%)

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