DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17717 and marchf7

DIOPT Version :10

Sequence 1:NP_572327.1 Gene:CG17717 / 31592 FlyBaseID:FBgn0029877 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001108052.2 Gene:marchf7 / 100136862 ZFINID:ZDB-GENE-080204-121 Length:768 Species:Danio rerio


Alignment Length:211 Identity:52/211 - (24%)
Similarity:82/211 - (38%) Gaps:66/211 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LQESL---HSANESGNSCRIC----RWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDN-- 132
            :||||   .|..|.|:.||||    :|:.|  .:|: ||.|.||:.|:|..|:|:|:..:..:  
Zfish   588 IQESLLLEESDEEEGDLCRICQMGEQWSSN--PLIE-PCKCTGSLQYVHQDCIKKWLRSKISSGS 649

  Fly   133 ------RCEICNAVFNIAEERASLKQMIRT-------FCCGRCCGLIVKHLLFSASLMPLAHIIL 184
                  .||:|....::..|...:.::.|:       |.   .|||.         |:.|.|:..
Zfish   650 NLEAITTCELCKEKLHLNIENFDINELYRSHERSEYEFI---SCGLY---------LVVLLHLCE 702

  Fly   185 QQVLQCMDNMNQGSTDQLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNILSHWWMFGSTS 249
            |:....:..:|...                         ||....|....:.|:.|.:    :.|
Zfish   703 QRFSDVLGAVNDAG-------------------------FFNLARTLHEHMDNLESSY----AES 738

  Fly   250 DFELVEIEDDSIDFFD 265
            |.:.||....||||.|
Zfish   739 DEDEVEDSRPSIDFCD 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17717NP_572327.1 RINGv 91..138 CDD:128983 19/58 (33%)
marchf7NP_001108052.2 RING_CH-C4HC3_MARCH7 605..663 CDD:438461 20/60 (33%)

Return to query results.
Submit another query.