DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3918 and Srek1ip1

DIOPT Version :10

Sequence 1:NP_572323.1 Gene:CG3918 / 31585 FlyBaseID:FBgn0029873 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001008374.1 Gene:Srek1ip1 / 361888 RGDID:1305356 Length:153 Species:Rattus norvegicus


Alignment Length:180 Identity:70/180 - (38%)
Similarity:99/180 - (55%) Gaps:40/180 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NKDTLRAACKKCGYAGHLTYQCRNFLKVDPNKEILLDVESTSSD------SELDYLTPLTELRAQ 67
            |||.:||.|:||||.||||::|||||:|||.::|:|||.||||:      .||:.|..|.|.|..
  Rat     7 NKDNVRAGCRKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEESEELNKLQALQEKRIN 71

  Fly    68 ELKSGAEVPPPTEPAVLPAAGKRDRSKDKSRDRLKAKKREREREREKVKEKEKEKGSRSKDKKRS 132
            |                    :.::.|:|||:::|.||: |:|......|::.     ||.||:.
  Rat    72 E--------------------EEEKKKEKSREKIKLKKK-RKRSNSSTTEEDS-----SKQKKQK 110

  Fly   133 HSKSSHKLAEKSKDKKSVRHKKHGKKRSRKHKKTTNTNNSSSNSSSELAK 182
            :.|...|..:|:|.||...|||..||| :|.|:       ||.:.||:.|
  Rat   111 YQKKEKKKEKKNKSKKGKHHKKEKKKR-KKEKR-------SSPNRSEVTK 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3918NP_572323.1 None
Srek1ip1NP_001008374.1 zf-CCHC_3 9..>30 CDD:404753 13/20 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..153 45/143 (31%)

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