DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and Rdh10

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_598593.1 Gene:Rdh10 / 98711 MGIID:1924238 Length:341 Species:Mus musculus


Alignment Length:291 Identity:74/291 - (25%)
Similarity:108/291 - (37%) Gaps:92/291 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 FRGFWAWAVLIFLIVLGILLFMWLLRKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKR 97
            |:..||:.         :....||:|.        |...:.|:|.::||..:|:|:...||.|:|
Mouse    12 FKVLWAFV---------LAAARWLVRP--------KEKSVAGQVCLITGAGSGLGRLFALEFARR 59

  Fly    98 GA--------------------RVYMACRDPGRCEAARL-------DIMDRSRNQQLFNRTLDLG 135
            .|                    .:|   ||....:||.|       :|:... |.|:|..|.|:|
Mouse    60 RALLVLWDINTQSNEETAGMVRHIY---RDLEAADAAALQAGKGEEEILPPC-NLQVFTYTCDVG 120

  Fly   136 SLQSVRNFVERFKAEESRLDILINNAGVMA------CPRTLTADGFEQQFGVNHLGHFLLTNLLL 194
            ..::|....||.:.|...:.:|:|||||::      ||..|    .|:...||...||..|...|
Mouse   121 KRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDEL----IERTMMVNCHAHFWTTKAFL 181

  Fly   195 DRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSKFFGAYSQSKLANILFTLKLSTILK---- 255
            ..:...:...||.|:|:..||.....||             |..||...:.|...||..||    
Mouse   182 PTMLEINHGHIVTVASSLGLFSTAGVED-------------YCASKFGVVGFHESLSHELKAAEK 233

  Fly   256 -------------DTGVTVNCCHPGVVRTEI 273
                         |||:...|    .:|.||
Mouse   234 DGIKTTLVCPYLVDTGMFRGC----RIRKEI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 67/250 (27%)
Rdh10NP_598593.1 17beta-HSDXI-like_SDR_c 38..307 CDD:187598 66/248 (27%)

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