DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3842 and AT4G11410

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_192880.1 Gene:AT4G11410 / 826745 AraportID:AT4G11410 Length:317 Species:Arabidopsis thaliana


Alignment Length:304 Identity:116/304 - (38%)
Similarity:157/304 - (51%) Gaps:38/304 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IDGK--VVIVTGCNTGIGKETVLELAKRGARVYMACR--DPG---------RCEAARLDIMDRSR 123
            |||.  ..||||.::|||:||...||.||..|.||.|  |.|         ....|::|:|    
plant    25 IDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAVRNTDSGNQVRDKILKEIPQAKIDVM---- 85

  Fly   124 NQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFL 188
                   .|||.|:.|||:|...:::.:..|::||||||:||||..|::|..|.||..|||||||
plant    86 -------KLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMACPFLLSSDNIELQFATNHLGHFL 143

  Fly   189 LTNLLLDRLKHSS-----PSRIVVVSSAAHLFG---RINREDLMSEKNYSKFFGAYSQSKLANIL 245
            ||||||:|:|.::     ..|||:|||..|.|.   .:..:.:..|..|:. ..||.||||.|||
plant   144 LTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREGVQFDKINDEARYNT-LQAYGQSKLGNIL 207

  Fly   246 FTLKLSTILKDTGV--TVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKTPKAGAQTQLRL 308
            ...:|:.:.|:.||  |.|..|||.:.|.:.|:.|....:..|:.|   |..|:...||.|....
plant   208 HATELARLFKEQGVNITANSLHPGSIMTNLLRYHSFINTIGNAVGK---YVLKSIPQGAATTCYA 269

  Fly   309 ALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWLWRESEKLLG 352
            ||.||.:|.:|.|..|..........::...|..||..|.:|.|
plant   270 ALHPQAKGVSGEYLMDNNISDPNSQGKDKDLAKKLWEFSLRLTG 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 111/295 (38%)
AT4G11410NP_192880.1 retinol-DH_like_SDR_c_like 29..305 CDD:212492 108/290 (37%)

Return to query results.
Submit another query.