DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and sro

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_651725.1 Gene:sro / 43512 FlyBaseID:FBgn0262112 Length:335 Species:Drosophila melanogaster


Alignment Length:340 Identity:85/340 - (25%)
Similarity:126/340 - (37%) Gaps:79/340 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 RKANRIDGK-VVIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARL--------DIMDRS 122
            |:..::|.: ||::|||::|:|....:...:......::|....:.|.|:|        |.:.|.
  Fly    18 RQQLKVDSRHVVLITGCDSGLGHSMAVYCHESLHMTVISCCHNIKSEGAKLLQGLASAKDGLSRM 82

  Fly   123 RNQQLFNRTLDLGSLQSVRNFVER------FKAEESRLDILINNAGVMACPR---TLTADGFEQQ 178
            ...:     |||....|:| .|.|      .|....||..||||||||....   .|| :..|.|
  Fly    83 HTLE-----LDLLEPDSIR-LVHRQLRDILAKDPSYRLTALINNAGVMCFGEFEWQLT-EQIEAQ 140

  Fly   179 FGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSKFFGAYSQSKLAN 243
            ...|.||...||:.||..|:... .||:.|:|...|      :.|.:       .|.|:.||.|.
  Fly   141 INCNLLGTMRLTHELLPLLRQQQ-GRIINVTSHCGL------QALPA-------LGPYAASKAAL 191

  Fly   244 ILFTLKLSTILKDTGVTVNCCHPGVVRTEIN------RH-------FSGP-------------GW 282
            ..:|..|...|:..|:.|....||....:.|      :|       ||..             |:
  Fly   192 RFWTDSLRVELQQYGMEVVNFIPGSFVLDSNIAARQQQHAQKMREAFSAEQHALYDTYFEAFNGY 256

  Fly   283 MKTALQKGSLYFFKTPKAGAQTQLRLALDPQLEGS--TGGYYSDCMRWPLFPWVRNM---QTADW 342
            :|.      |..||.|.......|.......|..|  ...|..:..|:.|:.|:..:   ...||
  Fly   257 LKV------LSGFKPPNRLRNESLLAKFKDALTSSQPLALYIEEPRRYRLYRWLFTLCPTPLVDW 315

  Fly   343 LWRESEKLLGLPPLE 357
            |   :.:...:|..|
  Fly   316 L---TVRFCAMPTYE 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 81/321 (25%)
sroNP_651725.1 17beta-HSD-like_SDR_c 27..300 CDD:187632 76/299 (25%)

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