DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and cbr1

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_919387.1 Gene:cbr1 / 373866 ZFINID:ZDB-GENE-030902-2 Length:276 Species:Danio rerio


Alignment Length:298 Identity:84/298 - (28%)
Similarity:121/298 - (40%) Gaps:65/298 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KVVIVTGCNTGIGKETVLELAKR-GARVYMACRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQ 138
            ||.:|||.|.|||...|..|.|. ...||::.||.||..|| :|.:.:.....||:: ||:....
Zfish     5 KVALVTGANKGIGFAIVRALCKEYTGDVYLSSRDVGRGTAA-VDSLKKEGLHPLFHQ-LDINDPN 67

  Fly   139 SVRNFVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLT----NLLLDRLKH 199
            |||...:.|:.:...||:||||||:..  :......|..|..|....:|..|    |:.|..:|.
Zfish    68 SVRTARDFFQEKYGGLDVLINNAGIAF--KMADTTPFGTQADVTLKTNFFATRDMCNVFLPIIKP 130

  Fly   200 SSPSRIVVVSS----------AAHLFGRINREDLM--------------------SEKNYSKFFG 234
            .  .|:|.|||          :..|..|...:|:.                    ||:.:..  .
Zfish   131 G--GRLVNVSSGMGSMALGRCSPELQARFRSDDITEEELNGLMERFVREAQEGVHSERGWPS--T 191

  Fly   235 AYSQSKLA-NILFTLKLSTILKD---TGVTVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFF 295
            ||..||.. ..|..::...:.|:   .|:..|.|.||.|||::    :||.            ..
Zfish   192 AYGISKTGLTTLTRIQARNLTKERPGDGILCNACCPGWVRTDM----AGPN------------AT 240

  Fly   296 KTPKAGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPW 333
            |:|..||.|.:.|||.|.......|.:...|:  :.||
Zfish   241 KSPDEGAITPVYLALLPAGAKEPHGQFVSEMK--VQPW 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 84/298 (28%)
cbr1NP_919387.1 carb_red_PTCR-like_SDR_c 5..276 CDD:187585 82/296 (28%)

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