DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and CG6012

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_609817.1 Gene:CG6012 / 35022 FlyBaseID:FBgn0032615 Length:308 Species:Drosophila melanogaster


Alignment Length:327 Identity:83/327 - (25%)
Similarity:119/327 - (36%) Gaps:60/327 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 AVLIFLIVLGILLFMWLLRKCIQGP------AYRKANRID-----GKVVIVTGCNTGIGKETVLE 93
            |:..||..:|:......|.:.::.|      .|....|..     |....|||.:.|||||...|
  Fly     4 ALSAFLTFVGVYALSSYLYEQLRTPYKLIKIRYFSGTRPTLKERFGDWAAVTGASDGIGKEYAKE 68

  Fly    94 LAKRGARVYMACRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILI 158
            ||::...|.:..|...:.:|...:|.|.....|......|......|...:|: :.....:.||:
  Fly    69 LARQNINVVLIARTEEKLQAVAKEIADCGAGVQTKIVIADFTKGSQVYEHIEK-ETANIPISILV 132

  Fly   159 NNAGVMACPRTLTADGFEQQFGV---NHLGHFLLTNLLLDRLKHSS-PSRIVVVSSAAHLFGRIN 219
            ||.|: |.|::|.....|:...:   |.:....|:.:...|:|.|. ...||.|.|...|....|
  Fly   133 NNVGI-ATPKSLLKYNQEETQNIIDTNVVAVSQLSRIFFQRMKASKLKGAIVNVGSGTELQPLPN 196

  Fly   220 REDLMSEKNYSKFFGA-YSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWM 283
                          || |:.||......||.|....|..|:.|....|..|.|:||.:       
  Fly   197 --------------GAYYAASKAYTRSLTLALYHEAKPYGIHVQMLSPNFVVTKINSY------- 240

  Fly   284 KTALQKGSLYFFKTPKAGAQ-----TQLRLALDPQLEGSTGGYYSDCMRWPLFPWVRNMQTADWL 343
            ...:.||.|..   |.|.|.     .|||..:|     .|.||        |:..|:|.....:.
  Fly   241 SRQIMKGGLLI---PSASAYAKSAVNQLRDEVD-----ETPGY--------LWHHVQNAVATAFT 289

  Fly   344 WR 345
            ||
  Fly   290 WR 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 75/282 (27%)
CG6012NP_609817.1 17beta-HSD1_like_SDR_c 49..296 CDD:187614 75/282 (27%)

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