DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and firl

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster


Alignment Length:242 Identity:56/242 - (23%)
Similarity:102/242 - (42%) Gaps:33/242 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FLIVLGILLFMWLLRKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRD- 107
            |.:.:.|||.:::  ..:|....:|...:.|::|::||...|||:|..|..|..|:.|  .|.| 
  Fly    27 FELYVRILLELFV--SLVQIVLPKKQKDVSGEIVLITGTGHGIGRELALHYASLGSTV--VCVDI 87

  Fly   108 PGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTL-- 170
            .|:.....::...|....::::.:.|:.....|....:|.|::...:.:|:||.|:|.....|  
  Fly    88 DGKNNLQTVEKAKRLNLGEVYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNVGIMPTHPILQQ 152

  Fly   171 TADGFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRIN--------------RE 221
            :|:..::.|.||....|......|..::......|:.:||.|.|.|..|              .|
  Fly   153 SAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGISNLVPYCATKFAVRGLME 217

  Fly   222 DLMSEKNYSKFFGAYSQSKLANILFTLKLSTILKDTGVTVNCCHPGV 268
            .|.:|         ..|....:::.|..:...:.:||:   |.||.|
  Fly   218 ALHAE---------LRQGPFRDLIRTTTIFPYMTNTGL---CKHPKV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 50/212 (24%)
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 49/210 (23%)

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