Protein Alignment CG3842 and pbr1

DIOPT Version :10

• Sequence 1: NP_572316.1
• Gene: CG3842 / 31576
• FlyBaseID: FBgn0029866
• Length: 406
• Species: Drosophila melanogaster
• Sequence 2: NP_593786.2
• Gene: pbr1 / 2542391
• PomBaseID: SPAC19A8.06
• Length: 376
• Species: Schizosaccharomyces pombe
• Alignment Length: 299
• Identity: 76/299 - (25%)
• Similarity: 129/299 - (43%)
• Gaps: 76/299 - (25%)

  Fly    71 RIDGKVVIVTGCNTGIGKETVLELAKRGARVYMACR-DPGRCEAAR-LDIMDRSRNQQLFNRTLD 133
            :::|.||:|||.::|||:..|.:||..||:|.:..| :|.:..... :|:..|::||.::....|
pombe    51 KMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQFTVDYIMDLRKRTKNQLIYTEVCD 115

  Fly   134 LGSLQSVRNFVERF--KAEESRLDILINNAGVMACP---RTLTADGFEQQFGVNHLGHFLLTNLL 193
            |.|:.|||.|..::  .....|||:::..:||:..|   |..|.:|.|.|:..|.||.:.|..:|
pombe   116 LSSMLSVRKFATKWIDCTPIRRLDMIVLCSGVLLPPFMDRQTTEEGVELQWATNFLGPYQLLRIL 180

  Fly   194 LDRLKHSSPS----RIVVVSSAAHLFGRINREDL-MSEKNYSKF--FGAYSQSKLANILF----- 246
            ...: :..|.    |||..:.::::.|.|:..|| :|...|.:.  :.....:|||.:.:
pombe   181 RPVI-YGQPGHREVRIVAATCSSYILGNIDFNDLDLSNHPYPRKSPWKVVGNAKLALMTYLYDFQ 244

  Fly   247 ------------TLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWMKTA------------- 286
                        ...|.||:         .:||||||        ||:.:..
pombe   245 KKAEAHERPDKMPCNLHTIM---------ANPGVVRT--------PGFRRVVSFGKVWGLFLYLL 292

  Fly   287 -------LQKGSLYFFKTPKAGAQTQLRLALDPQLEGST 318
                   |.||:::       |||:.......|:....|
pombe   293 LWPFWWLLLKGTIH-------GAQSFFHAICSPEFASIT 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3842	NP_572316.1	Rossmann-fold NAD(P)(+)-binding proteins	74..347	CDD:473865	76/296 (26%)
pbr1	NP_593786.2	retinol-DH_like_SDR_c_like	54..351	CDD:212492	76/296 (26%)