DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and E04F6.15

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_495501.1 Gene:E04F6.15 / 184041 WormBaseID:WBGene00017131 Length:319 Species:Caenorhabditis elegans


Alignment Length:299 Identity:97/299 - (32%)
Similarity:149/299 - (49%) Gaps:30/299 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMDRSRNQQLFNRTLDLGS 136
            :.||...:||..:|||.||...|..:||.|.|..|:....||::..::..:.|.|:.....||.|
 Worm    26 LSGKTFAITGTTSGIGVETAKALILKGAHVVMINRNYTASEASKKSLLIETPNAQIDIVQCDLNS 90

  Fly   137 LQSVRNFVERFKAEESRLDILINNAGVMACPRTLTADGFEQQFGVNHLGHFLLTNLLLDRLKHSS 201
            |.||:...:.:..::..|..||.||||.......|:||||..||:|||.||:|...||..|:.|:
 Worm    91 LSSVKKAADEYLEQKWPLHGLILNAGVFGPSEKTTSDGFEAHFGINHLAHFILIKELLPVLRESA 155

  Fly   202 PSRIVVVSS--AAHLFGR-----INREDLMSEKNYSK-FFGAYSQSKLANILFTLKLSTILKDTG 258
            |||||:|:|  :.|...:     :.:.|.:..|..:: :|..|::||:.|||...||........
 Worm   156 PSRIVIVTSMLSKHTCVKPDSRIVEKLDTLCPKEATQWYFRLYAKSKMCNILTAFKLHRDEFKNR 220

  Fly   259 VTVNCCHPGV-VRTEINRHFSGPGWMKTALQKGSLYFFKTPKAGAQTQLRLALDPQLEGSTGGYY 322
            ::|...|||. |||:::|.|.    :.:.....|:.|.|....||.|.|..|:.|:::..:|.|:
 Worm   221 ISVYAVHPGSGVRTDLHRDFG----LWSIADFLSIPFTKNASQGAATSLYCAVHPEVKELSGKYW 281

  Fly   323 SDCMRWPLFPW----------VRNMQTADWLWRESEKLL 351
            ..|       |          .|:.:..:.||..||||:
 Worm   282 ESC-------WDDEKNLDKKVSRDEELQEALWEHSEKLI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 93/291 (32%)
E04F6.15NP_495501.1 retinol-DH_like_SDR_c_like 28..306 CDD:212492 91/288 (32%)

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