DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3842 and Rdh11

DIOPT Version :10

Sequence 1:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_067532.2 Gene:Rdh11 / 17252 MGIID:102581 Length:316 Species:Mus musculus


Alignment Length:319 Identity:156/319 - (48%)
Similarity:195/319 - (61%) Gaps:17/319 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FLIVLGILLFMWL----LRKCIQGPAYRKANRIDGKVVIVTGCNTGIGKETVLELAKRGARVYMA 104
            ||::|.:...::|    :||.:.........::.|||.||||.||||||||..:||:||||||:|
Mouse     4 FLLLLSLPFILYLVTPKIRKMLSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLA 68

  Fly   105 CRDPGRCEAARLDIMDRSRNQQLFNRTLDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRT 169
            |||..:.|.|..:|...:.|.|:|.|.|||...:|:|.|.:.|.|||..|.:||||||||.||.:
Mouse    69 CRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYS 133

  Fly   170 LTADGFEQQFGVNHLGHFLLTNLLLDRLKHSSPSRIVVVSSAAHLFGRINREDLMSEKNYSKFFG 234
            .||||||...|||||||||||:|||::||.|:|||||.:||..|..|||:..:|..||.||... 
Mouse   134 KTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEKFYSAGL- 197

  Fly   235 AYSQSKLANILFTLKLSTILKDTGVTVNCCHPGVVRTEINRHFSGPGWMKTALQKGSLYFFKTPK 299
            ||..|||||||||.:|:..||.:|||....|||.|.:|:.|:.|...|    |.:....|.|||:
Mouse   198 AYCHSKLANILFTKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRW----LWQLFFVFIKTPQ 258

  Fly   300 AGAQTQLRLALDPQLEGSTGGYYSDCMRWPLFPWV----RNMQTADWLWRESEKLLGLP 354
            .||||.|..||...||..:|.::|||.    ..||    ||...|..||..|..|||||
Mouse   259 EGAQTSLYCALTEGLESLSGSHFSDCQ----LAWVSYQGRNEIIARRLWDVSCDLLGLP 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 144/276 (52%)
Rdh11NP_067532.2 Rossmann-fold NAD(P)(+)-binding proteins 38..306 CDD:473865 144/276 (52%)

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