DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3815 and phf12a

DIOPT Version :10

Sequence 1:NP_572311.1 Gene:CG3815 / 31571 FlyBaseID:FBgn0029861 Length:878 Species:Drosophila melanogaster
Sequence 2:XP_001919955.5 Gene:phf12a / 562152 ZFINID:ZDB-GENE-030131-3876 Length:941 Species:Danio rerio


Alignment Length:982 Identity:283/982 - (28%)
Similarity:425/982 - (43%) Gaps:219/982 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DPNASLSIMEQIKQLIRPPPNED----EKMMQRSTNTKHPYYRRPGRGHNHDYCDACEEGGNLLC 67
            |.:.|..:||:|:.|:.||.:||    .:...|||       ||.||..|||.||:|.|||:|||
Zfish    13 DLDTSGGLMEKIQTLLAPPKSEDGEKKNRKPDRST-------RRSGRATNHDICDSCREGGDLLC 70

  Fly    68 CDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSC--------------------RMSKLSQPPASSS 112
            ||.||::|||||.:||||.|.:|||.|:||.|                    ::.|.:.|||...
Zfish    71 CDHCPAAFHLQCCNPPLSREMLPSGDWMCHRCTVRKKKREQKKEQINGLLERQLGKQTPPPAPEQ 135

  Fly   113 KASSVERVPSAGSGSRANTPSSGDLESIPLKIRNLRKR---------SN---------SERNSTE 159
            ...::...||.|:|...       |.:...::|.|.:|         ||         ||:|.||
Zfish   136 DCGTLRLDPSVGTGGTG-------LRAAVAQVRLLERRHSSRPATPNSNTSSADTPTPSEQNDTE 193

  Fly   160 KLLAKMPMSIQRALDPNKKPT------PLDDVIRAATMMNPQQFSLPPELELHTQFPGNGKVQPV 218
            :.|..:....|.: :|....|      |.|.:|.||...||.||.||.:|...|..||..|    
Zfish   194 EDLLDVEDETQGS-EPELSNTTTTLKRPFDLLIAAAMQRNPTQFQLPNDLTCTTALPGTSK---- 253

  Fly   219 QQTHPPSGNGGNRRCAGNQRRNSKP-FELDAQGLVPLPAKTCFYCTRSCKRAPLISCDYCPLYFH 282
                      ..|:...:.:...:| .|||:.||||||.|.|:.|:|||:.||||.||:|||.||
Zfish   254 ----------RRRKDELSSKSVKRPQHELDSCGLVPLPVKVCYTCSRSCRLAPLIQCDFCPLLFH 308

  Fly   283 QDCLDPPLTALPAGLWMCPNHAENFIDANMTNSISATERVRLWNRFHQPLDHENVKLEFFRRVNT 347
            .|||||||||.|.|.||||||.:|.| .|. .|::.:.|.:|:::|...:....|||:|.:|::.
Zfish   309 MDCLDPPLTAFPTGRWMCPNHIQNLI-LNQ-RSLTISNRCQLFDQFQDCISQHAVKLDFLQRIHR 371

  Fly   348 RNPPFRTKRNLRARAHIEVPAIVRYHYDHPPPLLPSMRQTLRYDRVKRRNNLPTEVEE------I 406
            ::||.:...:.|::..::||..::..|.:||.|:.|.       .|:....:.|.:.|      :
Zfish   372 QHPPIQRSTHARSKKTLKVPDAIKSQYQNPPTLMASA-------GVREGELICTGLPEASVPQHL 429

  Fly   407 SRESVTESLLKDLEALR----------------TAHAKFREIQREFGTLETAIDGDSDSDPS-PE 454
            :.|......|||:.:|:                :.|.:..:::........|..|..:|.|. |.
Zfish   430 ASEDEQHQWLKDIISLQCSIMRHLRNRQTSHWDSEHTEKTDLKLRDSCQSAASQGSQNSSPKVPC 494

  Fly   455 EKRTE--------TNTPADKVNGEVDTENP-NTESNAQASEQPSVVKVESKTSLEVEASFEEDEE 510
            ...||        ||.|.|:......|::| .|::.:...|:|.:............|..:.::.
Zfish   495 SSCTEGLCQNCKTTNGPVDQSIQSNGTQDPVRTQNKSADREKPCLPMPSPPNHANSGAIIKGEDA 559

  Fly   511 DSKKSTGIIDADLLHLDVDIIKKLAHQRLQQLVEEHPEIVTQYKNRT-----AARRLRQLASVDG 570
            ..|..:|          .|::.. ||      |:..|........:|     ||.::.......|
Zfish   560 SLKPRSG----------TDVLPP-AH------VKSEPRTQPCDHAKTPPASDAAAKVSDSTVCTG 607

  Fly   571 THV-----AGETAALQGQLAPEDM--NRFSL--------LFTSETSSILAQKNGNAAD------E 614
            .|.     ....|...||.:|...  .:.||        ..:|.|...:::.:|...|      |
Zfish   608 AHAVKPQKVTSDAGSNGQRSPSSSCGGKSSLDSVMAGSGDISSCTEPNMSELSGRIKDIMQGGGE 672

  Fly   615 DPATALHPALATAAAIAAADAAAESYAPRARSDTEKAYELASRLELKLLQCKVQARAVITPLGDM 679
            ....||........|........:|.:...:|.:..:...|.|...:....:|||||.       
Zfish   673 VELNALDEKFIKLLAWQRIQQLFDSKSSPVQSSSPLSVSPAHRKHGEAQNREVQARAS------- 730

  Fly   680 LEDSRWFSSLGLDHSIFMRYRTLYIGYGGHYSPSTTLAQTETVDLSAIGYCCRISPQHAIIFYDE 744
                  |.|:. .:::.|.||:|:||.|....          |.|:..|:|..:|.:||.|||||
Zfish   731 ------FCSVS-GNAVNMCYRSLHIGTGADMD----------VCLTNYGHCNYVSGKHACIFYDE 778

  Fly   745 FSKSYELINYSEFGTEVNGQLYACDVTERMTTHAGKPMRPDDAELKKRVDEMLDKRRNINRQFET 809
            .:|.|||:||||.||.|:..||:||.:|:|:              :.....:|.|.:||.|:...
Zfish   779 NTKQYELLNYSEHGTTVDNILYSCDFSEKMS--------------QSPSSNLLTKVQNIIRRCRK 829

  Fly   810 K-KIDKERLAPIVKPA--------------CRCMNAGPVPMVDGA---WEGSAVLAHGSLLRFGC 856
            | :.|.....|..|..              |.|.|:|. .|:.|:   |||:|:|.|||.::.||
Zfish   830 KEQEDSLNSVPSAKEVTHMSCQSQDASVTPCNCKNSGS-RMIGGSGAGWEGTALLHHGSHVKLGC 893

  Fly   857 LSFVFVV 863
            |.|:|.:
Zfish   894 LQFIFSI 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3815NP_572311.1 PHD1_PHF12 55..99 CDD:277008 29/43 (67%)
BAH 75..198 CDD:470629 48/166 (29%)
PHF12_MRG_bd 175..211 CDD:465250 15/41 (37%)
PHD2_PHF12_Rco1 259..303 CDD:277009 31/43 (72%)
FHA 667..861 CDD:469597 70/211 (33%)
phf12aXP_001919955.5 None

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