DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3815 and Zmynd8

DIOPT Version :10

Sequence 1:NP_572311.1 Gene:CG3815 / 31571 FlyBaseID:FBgn0029861 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_651881.2 Gene:Zmynd8 / 43730 FlyBaseID:FBgn0039863 Length:1664 Species:Drosophila melanogaster


Alignment Length:741 Identity:136/741 - (18%)
Similarity:231/741 - (31%) Gaps:242/741 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RSTNTKHP----------YYRRPGRGHNHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDI 89
            ::|..|.|          .|..|.......:|..|...|.|:.|.:|..|||..|..|..::.| 
  Fly   315 KTTTAKTPEEEAAERLALIYEEPPTPGWDPFCWKCRGCGKLMPCSKCLRSFHSYCVRPATTKFD- 378

  Fly    90 PSGQWLCHSC----------RMSKLSQPPASSSKASSVERVPSAGSGSRANTPSSGDLESIPLKI 144
              ..|.|..|          |.:.:|....|...:.:::|:.......:..:|    ||..||  
  Fly   379 --SSWKCPECQVIEAAPKRLRRNGVSVDLLSQLLSFALDRMKHVRGAHKLRSP----LEVFPL-- 435

  Fly   145 RNLRKRSNSERNSTEKLLAKMPMSIQRALDPNKKPTPLDDVIRAATMMNPQQFSLPPELELHTQF 209
                         |.|.....|:|.:          .|...||.....:..:|....:...|...
  Fly   436 -------------TYKKFFVNPVSFE----------SLAQCIRNGAYQSTDEFLSEVKWIQHNAL 477

  Fly   210 ---PGNGKVQPVQQTHPPSGNGGNRRCAGNQRRNSKPFELDAQGLVPLPAKTCFYCTRSCKRAPL 271
               .|:.||:...:...       :.|  .|..|    |:|          ||..|        .
  Fly   478 ILDAGDAKVEQASKAVV-------KVC--RQEAN----EID----------TCPEC--------Y 511

  Fly   272 ISCDYCPLYFHQDCLDPPLTALPAGLWMCPNHAENFIDANMTNSISATERVRLWNRFHQPLDHEN 336
            ::.:....:|.:.|..|.|.     ||........:....|.:|.|....||.:.:.    |...
  Fly   512 LNANSSDEWFVKVCRHPHLL-----LWAKLKGFPYWPAKAMGSSNSTLVNVRFFGKH----DRAF 567

  Fly   337 VKLEFFRRVNTRNPPFRTKRNLRARAHIEVPAIVRYHYDHPPPLLPSMRQTLRYDRVKRR----N 397
            |.::.....:.:||..:|.|. .||...|....|..|.||                :||:    |
  Fly   568 VPVKDCFLYSAQNPNTQTSRR-SARDLAECIREVEIHIDH----------------IKRKIGAFN 615

  Fly   398 NLP--TEVEEISRESVTESLL--------KDLEAL----------RTAHAKFREIQREFGTLETA 442
            ..|  |..:.:..:...|.::        ::||..          :||..|...:::   |..|.
  Fly   616 YAPYRTPYDPLEEQQQLEQMMPGVYAAIDRELEPANKTPLQFLIRKTADDKLSIVKK---TKATE 677

  Fly   443 IDGDSDSDPSPEEKRTETNTPADKVNGEVDTENPNTESN-----AQASEQPS------VVKVESK 496
            ...:||..|||.:|.:|.:..:  |.|...:::.|.:||     :::.|..:      ::|.:|.
  Fly   678 SGNESDQSPSPTKKLSEVDVVS--VTGSGCSDHSNVKSNNYEVISRSGESLTDSRCKVLLKRKSL 740

  Fly   497 TSLEVEASFEEDEEDS-KKSTGIIDADLLHLDVDIIKKLAHQRLQQLVEEHPEIVTQYKNRTAAR 560
            .:..|..|.|..|..: |:...:.||.......:..:|..|.|.|.                   
  Fly   741 AAKIVAESVETSEAVAPKRKHSLSDASFTSESSEHKRKSKHARKQH------------------- 786

  Fly   561 RLRQLASVDGTHVAGETAALQGQLAPEDMNRFSLLFTSETSSILAQKNGNAADED--------PA 617
                    |......|.|...||..|:             |..::::|.|..||:        ..
  Fly   787 --------DNQDNQIEEAEKTGQEPPK-------------SPTISKQNENLRDEENVIENAANDT 830

  Fly   618 TALHPALATAAAI---------------------AAADAAA-------------------ESYAP 642
            ::..|..|:..::                     .|.|.||                   |:..|
  Fly   831 SSASPVSASVVSVVELVRRRQGVTITKIPREQQQTAEDTAAVPIPLPTAPPPKQNIPKGNEAANP 895

  Fly   643 RARSDTEKAYELASRLELKLLQCKVQ 668
            : :||.|:..|...:..:..::.|.:
  Fly   896 K-QSDVERQQEQLIKKVIPFIEIKTE 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3815NP_572311.1 PHD1_PHF12 55..99 CDD:277008 14/43 (33%)
BAH 75..198 CDD:470629 24/132 (18%)
PHF12_MRG_bd 175..211 CDD:465250 5/38 (13%)
PHD2_PHF12_Rco1 259..303 CDD:277009 8/43 (19%)
FHA 667..861 CDD:469597 0/2 (0%)
Zmynd8NP_651881.2 PHD_PRKCBP1 345..386 CDD:277013 14/43 (33%)
Bromo_RACK7 403..501 CDD:99940 21/135 (16%)
PWWP_PRKCBP1 523..616 CDD:438988 25/118 (21%)
zf-MYND 1399..1433 CDD:460312
PHA03247 <1427..1592 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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