DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3815 and CG8569

DIOPT Version :10

Sequence 1:NP_572311.1 Gene:CG3815 / 31571 FlyBaseID:FBgn0029861 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_610795.1 Gene:CG8569 / 36376 FlyBaseID:FBgn0033752 Length:608 Species:Drosophila melanogaster


Alignment Length:648 Identity:109/648 - (16%)
Similarity:194/648 - (29%) Gaps:257/648 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DQDPNASLSIMEQIKQLIRPPPNEDEKMM-------QRSTNTKHPYYR-----RPGRGHN----- 52
            |..|:|....|:::|:.:..|....|:.:       ..|.:.|:...|     |.|.|.:     
  Fly     4 DIPPSAIRIWMDKLKKGVGQPATVLERSLLNLMSAEAASLSVKNATERGILVARAGGGRSKRLAL 68

  Fly    53 --------------HDYCDACEEGGNLLCCDRCPSSFHLQC--HDPPLSEEDIPSGQWLCHSCRM 101
                          ..:|..|...|.:..|..|..|||..|  .||......:||.:...:...:
  Fly    69 AFCQKVSRLPSSPIDPFCFECHLPGAVKKCISCHRSFHENCQRQDPEKPNYSVPSDKGQPYQFPV 133

  Fly   102 SKLSQPPASSSKASSVERVPSAGSGSRANTP---SSGDLESIPLKIRNLRKRSNSE--------- 154
            ::|...|.::::.....:.|         ||   .:.::....|...:..|..|.|         
  Fly   134 NELDNQPLNNTQNLETPQTP---------TPLLDHNSNINQTLLATTDFLKHENIEWDDDVFFVC 189

  Fly   155 --RNSTEKLLAKMPMSIQRALDPNK-------------------KPTPLD--------------- 183
              :.:.::.|.::...:|.:||.::                   .|..||               
  Fly   190 EQKGARQRKLPRIKDELQSSLDSDEGSDLERCTHCRLLALAALHNPPQLDKQELGCLLKYSWDQH 254

  Fly   184 ------DVIR-AATMMNPQQFSLPPELELHTQFPGNGKVQPVQQTHPPSGNGGNRRCAGNQRRNS 241
                  ||.: .|...|.:..:|...|...|:..|.|.::              |..|..:....
  Fly   255 HSWISMDVAKYMAKHWNERDKALVKRLLFKTKILGLGDIE--------------RNIAAAKYTYL 305

  Fly   242 KPFELDAQGLVPLPAKTCFYCTRSCKRAPLISCDYCPLYFHQDCLDPPLTALPAGLWM------- 299
            ..|.:|...|....|                      ::|.|..::...|.     |:       
  Fly   306 TEFLMDLLDLQHNMA----------------------VFFGQKSVEYNATK-----WLMRDVTHD 343

  Fly   300 ------CPNHAENFIDANMTNSISATERVRLWNRFHQPL--DHENVKLEFFRRVNTRNPPFRTKR 356
                  ||:......:|::::         ||  |.:|.  .||   |.|.::|.  :||:    
  Fly   344 IREIRRCPDCYRYSNEASLSD---------LW--FAKPCLQRHE---LVFAKQVG--SPPW---- 388

  Fly   357 NLRARAHIEVPAIVRYHYDHPPPLLPSMRQTLRYD---------------------------RVK 394
                      ||.|         :..|.||.::||                           .:|
  Fly   389 ----------PAKV---------MSVSKRQPIKYDVRFFGGTHSRALISERDITPIESDIQSHIK 434

  Fly   395 RRNN--LPTEVEEI-----------------SRESVTESLLKDLEALRTAHAKFREIQREFGTLE 440
            .||:  |...::|:                 :..:|.|:|:|    :..:|..        .:.|
  Fly   435 PRNSRALSAAIKELQCHMMLSHYSASLFGFHADPTVAENLIK----VALSHCT--------ESTE 487

  Fly   441 TAIDGDSDSDPSPEEKRTETNTPADKVNGEVDTENPNTESNAQASEQPSVVKVESKTSLEVEA 503
            |:..|.....|:|.       ||....|..::....||.|.......|..|..:|.|:..::|
  Fly   488 TSASGKRGRPPTPA-------TPGAAKNRRLNNTTSNTSSPVPIRGIPDSVAYDSLTAEILQA 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3815NP_572311.1 PHD1_PHF12 55..99 CDD:277008 13/45 (29%)
BAH 75..198 CDD:470629 27/179 (15%)
PHF12_MRG_bd 175..211 CDD:465250 10/76 (13%)
PHD2_PHF12_Rco1 259..303 CDD:277009 6/56 (11%)
FHA 667..861 CDD:469597
CG8569NP_610795.1 PHD_SF 85..120 CDD:473978 11/34 (32%)
Bromo_ZMYND11 243..350 CDD:99924 19/147 (13%)
PWWP_BS69 369..457 CDD:438987 21/115 (18%)
zf-MYND 570..604 CDD:460312
Blue background indicates that the domain is not in the aligned region.

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