DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and RPT1

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_012777.1 Gene:RPT1 / 853712 SGDID:S000001628 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:443 Identity:190/443 - (42%)
Similarity:261/443 - (58%) Gaps:57/443 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PDNLRVKALSE-------------YRKKLLEH----KEIEGRLKEK---REEIKDL--TKLYD-- 49
            ||:.::..|:|             |..||.:.    |:||.|:|||   :|....|  :.|:|  
Yeast    21 PDDDKIVPLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIM 85

  Fly    50 ------KSENDLKALQSVGQIVGEVLKQLT-------------------------ED-KFIVKAT 82
                  ..|:.|:..:....|.|......|                         || |:::...
Yeast    86 GDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVINLK 150

  Fly    83 NGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLT 147
            ...::|||...::....::.|.||.:|.:...|...||..:||.|..|:.|:..|||||.:||..
Yeast   151 QIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCK 215

  Fly   148 DQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 212
            |||.:||||:|||||:||.|..:||.||||.||||||||||||.|||||::.||.|::|:.|.:|
Yeast   216 DQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 280

  Fly   213 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 277
            .||:||.||::||:|..||..:.||||.|||||:||.||.:|...|.|:|||::||:.|:||||.
Yeast   281 QKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDP 345

  Fly   278 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKL 342
            .|.:|::.|||||:|||||||||||:|||:|..||:.:.|..|.:||:..::....|.:|.|.:|
Yeast   346 RGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRL 410

  Fly   343 SDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV-SDNKKLESKLDY 394
            ..|..||:||:||||||:|||||.|:...::||:|||.|| |..||..|...|
Yeast   411 CPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRY 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 184/430 (43%)
RPT1NP_012777.1 PRK03992 154..466 CDD:179699 164/310 (53%)

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