DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and FTSH11

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_568787.1 Gene:FTSH11 / 835398 AraportID:AT5G53170 Length:806 Species:Arabidopsis thaliana


Alignment Length:287 Identity:108/287 - (37%)
Similarity:155/287 - (54%) Gaps:29/287 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYG 182
            |.|:|::..:    ..:....|:..:.|..|..:||.||:|. |.||..|.|:|...|||.||.|
plant   343 YSPKELNKEI----TPEKNVKTFKDVKGCDDAKQELEEVVEY-LKNPSKFTRLGGKLPKGILLTG 402

  Fly   183 PPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 247
            .|||||||||:|:|.:....|.....|...:.::|..||.:|.:|..|:...|||||:|||||:|
plant   403 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVG 467

  Fly   248 G-RRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPL 311
            . |:..||     ..::||.:||.:||||:....:.::.|||.||.|||||.||||.||.|.:|.
plant   468 STRKQWEG-----HTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPS 527

  Fly   312 PNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRA----------- 365
            |:.:.|.|||:::........::|.:||.:.:..||||||.|:   ..:.||:|           
plant   528 PDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANL---VNIAAIKAAVEGAEKLSSE 589

  Fly   366 EREYVIQEDFMKAVRKV----SDNKKL 388
            :.|:......|...||.    .|:|||
plant   590 QLEFAKDRIVMGTERKTMFVSEDSKKL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 105/284 (37%)
FTSH11NP_568787.1 HflB <350..784 CDD:440233 105/280 (38%)

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