Protein Alignment Rpt4 and yme1l1b

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001317997.1
• Gene: yme1l1b / 557907
• ZFINID: ZDB-GENE-070410-25
• Length: 715
• Species: Danio rerio
• Alignment Length: 380
• Identity: 123/380 - (32%)
• Similarity: 188/380 - (49%)
• Gaps: 67/380 - (17%)

  Fly    19 EYRKKLLEHKEI-------------EGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLK 70
            |..:|||::|.|             ||.||.:.     ||:...:|....:.:..|..:||  |.
Zfish   191 ETLEKLLKNKNIPEGQHDAFKTGFAEGFLKAQA-----LTQRTQESLRRTRLILLVLLLVG--LY 248

  Fly    71 QLTEDKFI---VKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSH 132
            .|::..|:   .:.|:|          ||.|                        |||:...
Zfish   249 GLSKTPFLSVRFRTTSG----------LDSA------------------------VDPVQMK--- 276

  Fly   133 EDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVAS 197
                :||:..:.|:.:...||:||:|. |.||:.|..:|...|||.||.|||||||||||||||.
Zfish   277 ----NVTFEHVKGVEEAKNELQEVVEF-LRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 336

  Fly   198 QLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 262
            :.|..|.....|...:.::|..|..||.:|..|:.:.||:||:||:|::||:|..  :......:
Zfish   337 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIE--SPMHPYSR 399

  Fly   263 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALK 327
            :|:.:||.:||||.....|.:|.|||.|:.||.||:||||.|.::.:|.|:.:.|.||||.:..|
Zfish   400 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLKK 464

  Fly   328 IAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV 382
            |.....::.|.|.:.:..|:||:|.|:..:|.|.|....::.|..::...|..|:
Zfish   465 IKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKI 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	123/380 (32%)
yme1l1b	NP_001317997.1	HflB	<274..709	CDD:440233	96/256 (38%)