Protein Alignment Rpt4 and psmc2

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_989155.1
• Gene: psmc2 / 394760
• XenbaseID: XB-GENE-1000016
• Length: 433
• Species: Xenopus tropicalis
• Alignment Length: 387
• Identity: 176/387 - (45%)
• Similarity: 251/387 - (64%)
• Gaps: 19/387 - (4%)

  Fly    12 LRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSEN-----------DLKALQSVGQI- 64
            |:....|.|.:::   |::|..:::..::|.:||.:.:....           |.:.|||...:
 Frog    33 LKTYGQSTYSRQI---KQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQ 94

  Fly    65 VGEVLKQLTED----KFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 125
            |....|.:..|    |:|:......::||....|:....::.|.||.:|.....|...||.::||
 Frog    95 VARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 159

  Fly   126 LVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTL 190
            .|..|..|:..|||||.:||..:||.:||||:|.|||:||.|:.:||.||||.||:|||||||||
 Frog   160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224

  Fly   191 LARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 255
            .|||||::.||.|::|:.|.:|.||:||.||::||:|..||..:.|:||.||||||||.||.:|.
 Frog   225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289

  Fly   256 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 320
            ..|.|:|||::||:||:||||..|.:|::|||||||||||||:||||||||||..||:.:.|..|
 Frog   290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 354

  Fly   321 LKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV 382
            .||||..::...:|.:|.:.:|..|..||::|:||||||:|||||.|:...::||::||.||
 Frog   355 FKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKV 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	175/386 (45%)
psmc2	NP_989155.1	PRK03992	44..430	CDD:179699	173/376 (46%)