DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and Rpt4R

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster


Alignment Length:393 Identity:325/393 - (82%)
Similarity:363/393 - (92%) Gaps:0/393 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ATPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVL 69
            |.|..|:.||:||:.||.|||||:|||.:||..|::.|.:...|:|||:||||||||||:|||:|
  Fly     6 ANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEIL 70

  Fly    70 KQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHED 134
            ||||.|.|||||:||||||||||||::|.|||.|||||||:||||||||||||||||||||:|||
  Fly    71 KQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHED 135

  Fly   135 PGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQL 199
            ||:|.|:.||||..||||||||||||||||::||||||:|||||||||||||||||||||:|||:
  Fly   136 PGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM 200

  Fly   200 DANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 264
            ||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
  Fly   201 DANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 265

  Fly   265 LMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIA 329
            ||||||||||||:|||||||||||||||||||||||||||||:|||||||.||::||||||..:.
  Fly   266 LMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLN 330

  Fly   330 KHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESKLDY 394
            |.|||||||:|||||.||||||||:||||||||:|.:||:||||||||||||::|||||||:|||
  Fly   331 KRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDY 395

  Fly   395 KPV 397
            ||:
  Fly   396 KPI 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 312/373 (84%)
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 312/374 (83%)

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