DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt4 and Y47C4A.1

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001362034.1 Gene:Y47C4A.1 / 189973 WormBaseID:WBGene00021615 Length:388 Species:Caenorhabditis elegans


Alignment Length:192 Identity:62/192 - (32%)
Similarity:97/192 - (50%) Gaps:16/192 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 IVDKYIGESARLIREMFNYARDHQPCI-------IFMDEIDAIGGRRFSEGTS-ADREIQRTLME 267
            |:|.:..|..:.::..|   :|...|.       .|:|.:...|  ||:.|.| ...|.::||.:
 Worm    15 IIDPHSVEGKKQLKIKF---KDVAGCSEAKVEIREFVDYLKNPG--RFTVGISGGSGEEEQTLNQ 74

  Fly   268 LLNQMDGFDS-LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKI-AK 330
            ||.:||...| .|.|.::.:|||.|.||.|||||||.||.|.|.||....|.::.:::..|| ..
 Worm    75 LLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLD 139

  Fly   331 HGEIDY-EAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESK 391
            |...:| :.:..|:.:|.|||:.|||.|:.:.|...:...|..:|...|:.:|....:..|:
 Worm   140 HAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYALDRVLAGSEKRSR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 61/186 (33%)
Y47C4A.1NP_001362034.1 HflB <24..370 CDD:440233 59/183 (32%)

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