Protein Alignment Rpt4 and ppgn-1

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_500191.3
• Gene: ppgn-1 / 177021
• WormBaseID: WBGene00021425
• Length: 747
• Species: Caenorhabditis elegans
• Alignment Length: 302
• Identity: 106/302 - (35%)
• Similarity: 164/302 - (54%)
• Gaps: 15/302 - (4%)

  Fly    99 KLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLN 163
            |.|....::..|:.:|..::  ..:||  :::..:....:.:..:.|.::...|:||.::. |.|
 Worm   247 KFKGSFNMSDMMSNMTKGKF--TIIDP--HSVEGKKQLKIKFKDVAGCSEAKVEIREFVDY-LKN 306

  Fly   164 PELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFN 228
            |..|.::|...|:|.||.||||.||||||:|:|::....|:.:..|..|:...|..|..||.:|.
 Worm   307 PGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFK 371

  Fly   229 YARDHQPCIIFMDEIDAIGGRRFSEGTSA-------DREIQRTLMELLNQMDGFDSLGQVKMIMA 286
            .||...||||::|||||||.:| |||..|       ..|.::||.:||.:|||..|...|.::.:
 Worm   372 EARSRAPCIIYIDEIDAIGRKR-SEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLAS 435

  Fly   287 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKI-AKHGEIDY-EAIVKLSDNFNGA 349
            |||.|.||.|||||||.||.|.|.||....|.::.:::..|| ..|...:| :.:..|:..|.||
 Worm   436 TNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGA 500

  Fly   350 DLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESK 391
            |:.|||.|:.:.|...:...|..:|...|:.:|....:..|:
 Worm   501 DIMNVCNESAIRAASNKCHVVTHKDMEYALDRVLAGSEKRSR 542

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	105/296 (35%)
ppgn-1	NP_500191.3	FtsH_ext	111..212	CDD:377663
		HflB	<277..725	CDD:440233	100/268 (37%)