Protein Alignment Rpt4 and ymel-1

DIOPT Version :10

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001366715.1
• Gene: ymel-1 / 176460
• WormBaseID: WBGene00010842
• Length: 723
• Species: Caenorhabditis elegans
• Alignment Length: 368
• Identity: 126/368 - (34%)
• Similarity: 189/368 - (51%)
• Gaps: 38/368 - (10%)

  Fly     9 PDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLT 73
            |....||:...|..:||..|      |:|..|  ...:.:::.|:|||.|..        .:|.|
 Worm   123 PTQDEVKSPLTYFSELLAGK------KQKTSE--GGVEKWNQYESDLKKLPE--------NQQRT 171

  Fly    74 EDKFIVKA--TNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYL---------PREVDPLV 127
            .....||.  :||   |.|..:  |..|..:.||..:.:.......||         .|::..|.
 Worm   172 YTDGFVKGLLSNG---VSGAGK--DGKKSNTLTRFYIFLVFCIFFGYLTGRIRVRVGDRQIGSLF 231

  Fly   128 YNMSHE-DPGD--VTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKT 189
            ::...| :|.|  ||:..:.|:.:...|:.|:::. |.:||.:.|:|...|||.||.||||||||
 Worm   232 FSNPQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKT 295

  Fly   190 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEG 254
            |||||:|.:....|.....|...:..:|:.||.:|::|:.|:...|||||:||||::|.:|.|
 Worm   296 LLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVS-- 358

  Fly   255 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 319
            .|......:|:.:||::||||.....:.:|.||||.|.||.|||||||.|.::.:|.|:...|::
 Worm   359 NSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVD 423

  Fly   320 ILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFA 362
            |...:..||...|.||.:.:.|.|..|.|||:.|:..:|.|.|
 Worm   424 IFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKA 466

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	PRK03992	13..387	CDD:179699	125/364 (34%)
ymel-1	NP_001366715.1	HflB	170..686	CDD:440233	110/305 (36%)